Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC141Q6ZP82 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AP001273.1-201ENST00000624493 3152 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 HMGB1P37-201ENST00000439613 609 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 RPS3AP46-201ENST00000448352 682 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 RN7SKP18-201ENST00000516005 275 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 IGKV2-23-201ENST00000518729 323 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AC093524.1-201ENST00000564266 1094 ntBASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC141Q6ZP82 AC008280.1-201ENST00000418851 412 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC114814.2-201ENST00000419195 485 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 HSPD1P21-201ENST00000436541 245 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 RPS3AP12-201ENST00000443616 753 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 PPIAP3-201ENST00000450588 505 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 UBDP1-202ENST00000457888 382 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC008155.2-201ENST00000464337 397 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 FTH1P11-201ENST00000517577 551 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC007066.2-202ENST00000566531 914 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL773545.4-201ENST00000637262 310 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL513478.4-201ENST00000641636 310 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC074029.4-201ENST00000624796 1859 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL035423.1-201ENST00000420331 213 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 MAPRE1P3-201ENST00000435438 796 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 RPS26P28-201ENST00000470806 348 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 RN7SL293P-201ENST00000481765 281 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 WBP1LP4-201ENST00000505043 344 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC008802.1-201ENST00000519121 791 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 OR5M7P-201ENST00000526140 972 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 MIR3200-201ENST00000580767 85 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 MIR7975-201ENST00000619350 68 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 AC079684.1-201ENST00000621405 437 ntBASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC141Q6ZP82 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 RNA5SP72-201ENST00000364442 117 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 MIR483-201ENST00000385070 76 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 MIR34B-201ENST00000385076 84 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 HSPE1P16-201ENST00000426640 348 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 CYCSP4-201ENST00000429682 331 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 RPS4XP12-201ENST00000461747 709 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 RNA5SP164-201ENST00000516533 110 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 OR8I1P-201ENST00000529291 931 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 AC016839.1-201ENST00000578162 867 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 AC095038.2-201ENST00000621464 1070 ntBASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC141Q6ZP82 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC141Q6ZP82 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms