Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 EEF1A1P39-201ENST00000440791 250 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 CYCSP42-201ENST00000450823 238 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AL445433.1-201ENST00000457507 257 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 MTND4LP3-201ENST00000468320 276 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC008494.2-201ENST00000514544 370 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 HMGB1P1-201ENST00000522557 636 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC021006.3-201ENST00000530771 192 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC084824.1-201ENST00000550917 1005 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC012254.4-201ENST00000588843 273 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC097505.1-201ENST00000610199 565 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 TUSC7.1-201ENST00000610969 165 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 HULC.1-201ENST00000612720 240 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AL603755.1-201ENST00000619504 163 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC087385.3-201ENST00000620477 187 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC018445.2-201ENST00000622987 260 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 OR8B1P-202ENST00000641132 1178 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 NCLP2-201ENST00000416078 1462 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 ZNF849P-201ENST00000594711 1566 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AL359922.3-201ENST00000624779 1670 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AC093536.2-201ENST00000565257 1406 ntBASIC4.72□□□□□ -1.65
ZNF549Q6P9A3 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.65
ZNF549Q6P9A3 AL121950.1-201ENST00000624993 2077 ntBASIC4.71□□□□□ -1.65
ZNF549Q6P9A3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 U6.112-201ENST00000384129 70 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 RNU6-932P-201ENST00000391108 106 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AL590762.2-201ENST00000395798 571 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 RPL7P27-201ENST00000403775 720 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 FCF1P5-201ENST00000406490 482 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC012519.1-201ENST00000424588 610 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 PTENP1-201ENST00000447117 1215 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 OR52J1P-201ENST00000450596 932 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC091868.1-201ENST00000508746 304 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC021146.7-201ENST00000509604 775 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC133555.2-201ENST00000550213 292 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC051619.2-201ENST00000559063 397 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC015688.2-201ENST00000584523 262 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC211433.2-201ENST00000608433 387 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 AL356317.1-201ENST00000396110 1436 ntBASIC4.71□□□□□ -1.66
ZNF549Q6P9A3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PCAT14-202ENST00000627127 3935 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RNA5SP191-201ENST00000362585 102 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 Y_RNA.51-201ENST00000362725 102 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RNU6-623P-201ENST00000363143 105 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 SNORA51.8-201ENST00000384234 132 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RNU6-31P-201ENST00000384388 108 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RNU1-82P-201ENST00000390851 165 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 SNORD65-201ENST00000391079 73 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms