Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL593851.1-201ENST00000426171 157 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL354941.1-201ENST00000438600 464 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 MTCYBP3-201ENST00000445588 1137 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 YWHAQP9-201ENST00000445891 512 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 BX842559.2-201ENST00000451418 605 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL389915.2-201ENST00000454576 441 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 TPTE2P5-203ENST00000458118 728 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 RPL31P3-201ENST00000458430 332 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 RN7SL329P-201ENST00000467740 299 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 GAPDHP36-201ENST00000480688 918 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC091435.1-201ENST00000505442 584 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 RPS4XP20-201ENST00000505751 772 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC111000.2-201ENST00000507775 550 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 RNU6-232P-201ENST00000517144 64 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC040958.1-201ENST00000561102 201 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AP005136.1-201ENST00000579765 429 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AL390838.2-201ENST00000602394 274 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 NTAN1P1-201ENST00000603150 646 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 DUXAP11-201ENST00000603858 526 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AP003973.1-201ENST00000604639 691 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC004948.1-201ENST00000609858 672 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC092140.2-201ENST00000618027 521 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC015726.3-201ENST00000624501 418 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC093849.1-201ENST00000563631 2209 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 AC008079.2-201ENST00000623543 20396 ntBASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD3Q3KNS1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 TRIM51GP-201ENST00000534741 1350 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 FAM3C2-201ENST00000312214 681 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 MIR937-201ENST00000401271 86 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 GSTA8P-201ENST00000404253 637 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 RNA5SP80-201ENST00000410475 111 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 RN7SKP126-201ENST00000411143 300 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 SEPT7P5-201ENST00000434048 306 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AL031663.1-201ENST00000437445 219 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 RPS29P10-201ENST00000439197 166 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 UBE2D3P4-201ENST00000441973 436 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 RNU7-125P-201ENST00000458760 62 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 BX284632.1-201ENST00000478218 541 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 TCP11X3P-202ENST00000514289 1254 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 IGKV2-36-201ENST00000519999 223 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC008562.1-201ENST00000521763 330 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC100784.1-201ENST00000522790 310 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 OR5AZ1P-201ENST00000527448 943 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 ISCA1P3-201ENST00000577104 373 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC022069.1-201ENST00000582910 658 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC087763.1-201ENST00000603391 286 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 TAS2R6P-201ENST00000605022 826 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC122133.1-201ENST00000613964 233 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 CDRT1-208ENST00000630868 794 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 AC068620.4-201ENST00000636730 1182 ntBASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD3Q3KNS1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms