Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NPM1P47-201ENST00000560843 856 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 DPRXP4-201ENST00000578053 568 ntBASIC3.2□□□□□ -1.9
CMC4P56277 MIR4716-201ENST00000579628 84 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AP005262.1-201ENST00000582646 997 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 MTCO3P22-201ENST00000603219 784 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AL160290.3-201ENST00000604869 165 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC243654.2-201ENST00000612843 443 ntBASIC3.2□□□□□ -1.9
CMC4P56277 MIR7973-1-201ENST00000614683 76 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC009318.3-201ENST00000616916 503 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AL121890.3-201ENST00000618494 516 ntBASIC3.2□□□□□ -1.9
CMC4P56277 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 MIR3653-201ENST00000625572 110 ntBASIC3.2□□□□□ -1.9
CMC4P56277 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.2□□□□□ -1.9
CMC4P56277 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.2□□□□□ -1.9
CMC4P56277 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 AL592437.2-201ENST00000421655 2434 ntBASIC3.2□□□□□ -1.9
CMC4P56277 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CMC4P56277 AC104260.2-201ENST00000623551 3497 ntBASIC3.2□□□□□ -1.9
CMC4P56277 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.19□□□□□ -1.9
CMC4P56277 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CMC4P56277 RNU4-39P-201ENST00000362455 127 ntBASIC3.19□□□□□ -1.9
CMC4P56277 RNU1-14P-201ENST00000362759 152 ntBASIC3.19□□□□□ -1.9
CMC4P56277 SNORA27.3-201ENST00000364937 134 ntBASIC3.19□□□□□ -1.9
CMC4P56277 RNA5SP151-201ENST00000365632 117 ntBASIC3.19□□□□□ -1.9
CMC4P56277 RNU6-244P-201ENST00000391028 104 ntBASIC3.19□□□□□ -1.9
CMC4P56277 RNU4-74P-201ENST00000411280 161 ntBASIC3.19□□□□□ -1.9
CMC4P56277 GSTM3P2-201ENST00000412746 530 ntBASIC3.19□□□□□ -1.9
CMC4P56277 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.19□□□□□ -1.9
CMC4P56277 AL592293.2-201ENST00000422292 996 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AL590623.1-201ENST00000427864 105 ntBASIC3.19□□□□□ -1.9
CMC4P56277 SKP1P3-201ENST00000429280 487 ntBASIC3.19□□□□□ -1.9
CMC4P56277 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CMC4P56277 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.19□□□□□ -1.9
CMC4P56277 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 TPT1P12-201ENST00000448968 492 ntBASIC3.19□□□□□ -1.9
CMC4P56277 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.19□□□□□ -1.9
CMC4P56277 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 RN7SL459P-201ENST00000481078 302 ntBASIC3.19□□□□□ -1.9
CMC4P56277 RN7SL271P-201ENST00000487601 295 ntBASIC3.19□□□□□ -1.9
CMC4P56277 BNIP3P41-201ENST00000503774 571 ntBASIC3.19□□□□□ -1.9
CMC4P56277 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 OR51K1P-201ENST00000510214 950 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 AL121834.1-201ENST00000572284 509 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.19□□□□□ -1.9
CMC4P56277 AC090312.1-201ENST00000580637 348 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.19□□□□□ -1.9
CMC4P56277 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.19□□□□□ -1.9
CMC4P56277 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.19□□□□□ -1.9
CMC4P56277 AC012557.1-201ENST00000607115 611 ntBASIC3.19□□□□□ -1.9
CMC4P56277 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.19□□□□□ -1.9
CMC4P56277 MIR7703-201ENST00000620784 77 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AC079298.2-201ENST00000623885 459 ntBASIC3.19□□□□□ -1.9
CMC4P56277 AP005264.7-201ENST00000625003 745 ntBASIC3.19□□□□□ -1.9
CMC4P56277 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMC4P56277 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.19□□□□□ -1.9
CMC4P56277 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.19□□□□□ -1.9
CMC4P56277 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 AC005261.4-201ENST00000600047 1385 ntBASIC3.18□□□□□ -1.9
CMC4P56277 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CMC4P56277 SNORA60-201ENST00000362396 134 ntBASIC3.18□□□□□ -1.9
CMC4P56277 RNU1-108P-201ENST00000362556 161 ntBASIC3.18□□□□□ -1.9
CMC4P56277 Z86062.1-201ENST00000406773 777 ntBASIC3.18□□□□□ -1.9
CMC4P56277 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 RPL23AP26-201ENST00000412728 464 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 AL807761.1-201ENST00000417622 171 ntBASIC3.18□□□□□ -1.9
CMC4P56277 NPM1P24-201ENST00000428039 894 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 RPS24P8-201ENST00000431490 402 ntBASIC3.18□□□□□ -1.9
CMC4P56277 PRELID3BP10-201ENST00000431957 584 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC073143.1-201ENST00000436316 395 ntBASIC3.18□□□□□ -1.9
CMC4P56277 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 RPL23AP89-201ENST00000439324 255 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 RPS29P19-201ENST00000479709 171 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC091167.1-201ENST00000492017 396 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC090543.1-201ENST00000492168 485 ntBASIC3.18□□□□□ -1.9
CMC4P56277 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms