Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EIF5AP4-201ENST00000441206 465 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 CEACAMP9-201ENST00000442990 513 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 AC023274.2-201ENST00000445264 521 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 MTND3P10-201ENST00000450967 341 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 MTCO3P20-201ENST00000454926 688 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC112187.1-201ENST00000455837 479 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 AC114728.1-201ENST00000488289 483 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC012170.1-201ENST00000495139 359 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 AC018797.3-201ENST00000513388 1241 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 SCARNA18.1-201ENST00000516330 83 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 COX6CP8-201ENST00000522620 226 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AP001893.2-201ENST00000526949 202 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.47□□□□□ -1.53
GFRA1P56159 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 AL390334.1-201ENST00000556395 450 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 AC090312.1-201ENST00000580637 348 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.47□□□□□ -1.53
GFRA1P56159 BBIP1P1-201ENST00000602999 279 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 AC080013.4-201ENST00000607624 649 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 MIR6809-201ENST00000612189 116 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.47□□□□□ -1.53
GFRA1P56159 AL359314.1-201ENST00000616913 261 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AC068722.2-201ENST00000618734 544 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 AL136228.1-201ENST00000622221 319 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 AP003400.3-201ENST00000624904 346 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 SHQ1P1-201ENST00000437111 1544 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
GFRA1P56159 RARSP1-201ENST00000542842 1418 ntBASIC5.47□□□□□ -1.53
GFRA1P56159 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.47□□□□□ -1.53
GFRA1P56159 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.47□□□□□ -1.53
GFRA1P56159 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.46□□□□□ -1.53
GFRA1P56159 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 GNL2P1-201ENST00000451274 2190 ntBASIC5.46□□□□□ -1.53
GFRA1P56159 AC022034.1-201ENST00000512867 2156 ntBASIC5.46□□□□□ -1.53
GFRA1P56159 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
GFRA1P56159 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA1P56159 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
GFRA1P56159 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA1P56159 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA1P56159 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA1P56159 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA1P56159 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 AP003170.5-201ENST00000397185 335 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA1P56159 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GFRA1P56159 AL109913.1-201ENST00000421173 514 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC069157.1-201ENST00000421749 137 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AL031736.2-201ENST00000426573 787 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA1P56159 RPL36P19-201ENST00000430744 301 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 AL358934.1-201ENST00000432346 324 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 RPL23AP74-201ENST00000437246 471 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA1P56159 AL445466.1-201ENST00000448432 357 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.46□□□□□ -1.54
GFRA1P56159 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 TRBV26-201ENST00000456572 344 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC094085.1-201ENST00000468914 584 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC013356.1-201ENST00000489027 564 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 SAP18P1-201ENST00000512058 390 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC060775.1-201ENST00000518241 520 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 AP000859.1-201ENST00000525536 307 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 OR5AQ1P-201ENST00000527596 927 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA1P56159 AP004609.2-201ENST00000532177 190 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 CBX3P7-201ENST00000532876 502 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.46□□□□□ -1.54
GFRA1P56159 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA1P56159 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.46□□□□□ -1.54
GFRA1P56159 AL157394.1-201ENST00000562983 1224 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 MIR4310-201ENST00000582950 57 ntBASIC5.46□□□□□ -1.54
GFRA1P56159 AC119403.2-201ENST00000590960 598 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms