Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 C1DP1-201ENST00000426049 402 ntBASIC5.21□□□□□ -1.58
COPB1P53618 VN1R108P-201ENST00000431580 830 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 MRPL35P4-201ENST00000453682 566 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 DEFB109F-201ENST00000491870 277 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 AC034244.1-201ENST00000507687 207 ntBASIC5.21□□□□□ -1.58
COPB1P53618 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.21□□□□□ -1.58
COPB1P53618 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.21□□□□□ -1.58
COPB1P53618 OR5AK3P-201ENST00000527486 1297 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.21□□□□□ -1.58
COPB1P53618 AP000676.2-201ENST00000529711 301 ntBASIC5.21□□□□□ -1.58
COPB1P53618 DEFB130C-202ENST00000530001 230 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC125611.1-201ENST00000549563 229 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 MIR5699-201ENST00000578903 90 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC015688.2-201ENST00000584523 262 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC006116.3-201ENST00000592968 361 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AP002884.5-201ENST00000595053 1132 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.21□□□□□ -1.58
COPB1P53618 AC146944.4-201ENST00000602697 718 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AL020997.3-201ENST00000602843 359 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC087763.1-201ENST00000603391 286 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC024940.4-201ENST00000605507 246 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC009237.15-201ENST00000610252 501 ntBASIC5.21□□□□□ -1.58
COPB1P53618 Mico1.1-201ENST00000611698 204 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC090510.2-201ENST00000617465 629 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC011815.3-201ENST00000624194 473 ntBASIC5.21□□□□□ -1.58
COPB1P53618 AC024023.1-201ENST00000624530 922 ntBASIC5.21□□□□□ -1.58
COPB1P53618 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.21□□□□□ -1.58
COPB1P53618 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 AC011503.2-201ENST00000594230 1500 ntBASIC5.21□□□□□ -1.58
COPB1P53618 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
COPB1P53618 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COPB1P53618 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.21□□□□□ -1.58
COPB1P53618 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COPB1P53618 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 RN7SKP115-201ENST00000363177 317 ntBASIC5.2□□□□□ -1.58
COPB1P53618 RN7SKP103-201ENST00000363848 320 ntBASIC5.2□□□□□ -1.58
COPB1P53618 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 U3.30-201ENST00000391308 210 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AL590762.2-201ENST00000395798 571 ntBASIC5.2□□□□□ -1.58
COPB1P53618 BTF3P8-201ENST00000414577 526 ntBASIC5.2□□□□□ -1.58
COPB1P53618 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 ELOCP9-201ENST00000418624 239 ntBASIC5.2□□□□□ -1.58
COPB1P53618 FO393419.3-201ENST00000428741 282 ntBASIC5.2□□□□□ -1.58
COPB1P53618 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 PSMC1P13-201ENST00000458195 985 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC107015.1-201ENST00000466902 747 ntBASIC5.2□□□□□ -1.58
COPB1P53618 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 MTND2P14-201ENST00000482139 351 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC104971.1-201ENST00000495117 578 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC008953.1-201ENST00000497334 318 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC023050.1-201ENST00000498198 304 ntBASIC5.2□□□□□ -1.58
COPB1P53618 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 HPRT1P2-201ENST00000505250 544 ntBASIC5.2□□□□□ -1.58
COPB1P53618 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COPB1P53618 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 RN7SL802P-201ENST00000577858 299 ntBASIC5.2□□□□□ -1.58
COPB1P53618 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
COPB1P53618 MIR4646-201ENST00000580775 63 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
COPB1P53618 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 AC020910.3-201ENST00000603701 874 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AL022161.1-201ENST00000604390 213 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AC016877.3-201ENST00000606778 504 ntBASIC5.2□□□□□ -1.58
COPB1P53618 AL049539.1-201ENST00000611964 459 ntBASIC5.2□□□□□ -1.58
COPB1P53618 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
COPB1P53618 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
COPB1P53618 LINC02211-204ENST00000642024 1070 ntBASIC5.2□□□□□ -1.58
COPB1P53618 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.2□□□□□ -1.58
COPB1P53618 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms