Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC026726.1-201ENST00000512859 601 ntBASIC4.6□□□□□ -1.67
ACLYP53396 RN7SKP141-201ENST00000516167 338 ntBASIC4.6□□□□□ -1.67
ACLYP53396 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
ACLYP53396 AC109635.6-201ENST00000525487 1113 ntBASIC4.6□□□□□ -1.67
ACLYP53396 AL390334.1-201ENST00000556395 450 ntBASIC4.6□□□□□ -1.67
ACLYP53396 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.6□□□□□ -1.67
ACLYP53396 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.6□□□□□ -1.67
ACLYP53396 AC017100.2-201ENST00000584628 355 ntBASIC4.6□□□□□ -1.67
ACLYP53396 MIR8069-1-201ENST00000616627 86 ntBASIC4.6□□□□□ -1.67
ACLYP53396 AC234782.5-201ENST00000617723 324 ntBASIC4.6□□□□□ -1.67
ACLYP53396 MIR8069-2-201ENST00000621412 86 ntBASIC4.6□□□□□ -1.67
ACLYP53396 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.6□□□□□ -1.67
ACLYP53396 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACLYP53396 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ACLYP53396 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
ACLYP53396 MIR365B-201ENST00000362317 111 ntBASIC4.59□□□□□ -1.67
ACLYP53396 RNU1-44P-201ENST00000384453 163 ntBASIC4.59□□□□□ -1.67
ACLYP53396 AL078604.1-201ENST00000404609 466 ntBASIC4.59□□□□□ -1.67
ACLYP53396 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.59□□□□□ -1.67
ACLYP53396 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.59□□□□□ -1.67
ACLYP53396 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 EIF4A1P1-201ENST00000420241 934 ntBASIC4.59□□□□□ -1.67
ACLYP53396 OR5BE1P-201ENST00000425977 939 ntBASIC4.59□□□□□ -1.67
ACLYP53396 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.59□□□□□ -1.67
ACLYP53396 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.59□□□□□ -1.67
ACLYP53396 AC006011.1-201ENST00000442758 349 ntBASIC4.59□□□□□ -1.67
ACLYP53396 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 RPL7P1-201ENST00000468161 747 ntBASIC4.59□□□□□ -1.67
ACLYP53396 RPL7P9-201ENST00000468715 747 ntBASIC4.59□□□□□ -1.67
ACLYP53396 RPL23AP37-201ENST00000479658 549 ntBASIC4.59□□□□□ -1.67
ACLYP53396 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.59□□□□□ -1.67
ACLYP53396 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.59□□□□□ -1.67
ACLYP53396 CCNG2P1-201ENST00000549521 1000 ntBASIC4.59□□□□□ -1.67
ACLYP53396 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ACLYP53396 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.59□□□□□ -1.67
ACLYP53396 AL161756.2-201ENST00000604597 246 ntBASIC4.59□□□□□ -1.67
ACLYP53396 GMCL1P2-201ENST00000605230 823 ntBASIC4.59□□□□□ -1.67
ACLYP53396 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.59□□□□□ -1.67
ACLYP53396 OR5BE1P-202ENST00000641168 1176 ntBASIC4.59□□□□□ -1.67
ACLYP53396 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ACLYP53396 AL672167.1-205ENST00000641112 3080 ntBASIC4.59□□□□□ -1.68
ACLYP53396 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ACLYP53396 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
ACLYP53396 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ACLYP53396 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 VDAC2P1-201ENST00000399358 958 ntBASIC4.58□□□□□ -1.68
ACLYP53396 MIR1179-201ENST00000408703 91 ntBASIC4.58□□□□□ -1.68
ACLYP53396 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 AC013470.3-201ENST00000420252 1194 ntBASIC4.58□□□□□ -1.68
ACLYP53396 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.58□□□□□ -1.68
ACLYP53396 MTND4LP13-201ENST00000425022 298 ntBASIC4.58□□□□□ -1.68
ACLYP53396 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.58□□□□□ -1.68
ACLYP53396 OR9M1P-201ENST00000459641 921 ntBASIC4.58□□□□□ -1.68
ACLYP53396 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.58□□□□□ -1.68
ACLYP53396 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 RN7SL339P-201ENST00000580597 296 ntBASIC4.58□□□□□ -1.68
ACLYP53396 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.58□□□□□ -1.68
ACLYP53396 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 AC097505.1-201ENST00000610199 565 ntBASIC4.58□□□□□ -1.68
ACLYP53396 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
ACLYP53396 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACLYP53396 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.58□□□□□ -1.68
ACLYP53396 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.57□□□□□ -1.68
ACLYP53396 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.57□□□□□ -1.68
ACLYP53396 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.57□□□□□ -1.68
ACLYP53396 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.57□□□□□ -1.68
ACLYP53396 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACLYP53396 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.57□□□□□ -1.68
ACLYP53396 TBCAP1-201ENST00000436520 327 ntBASIC4.57□□□□□ -1.68
ACLYP53396 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.57□□□□□ -1.68
ACLYP53396 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.57□□□□□ -1.68
ACLYP53396 RPS4XP4-201ENST00000443195 763 ntBASIC4.57□□□□□ -1.68
ACLYP53396 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.57□□□□□ -1.68
ACLYP53396 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.57□□□□□ -1.68
ACLYP53396 AC037198.2-201ENST00000478845 733 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms