Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RAB5CP1-201ENST00000395972 580 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 RNU2-37P-201ENST00000410695 177 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 SNORA57.3-201ENST00000411095 141 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AP000534.2-201ENST00000412729 568 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 AL590139.1-201ENST00000416267 400 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.97□□□□□ -1.77
GTF2A1P52655 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.97□□□□□ -1.77
GTF2A1P52655 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.97□□□□□ -1.77
GTF2A1P52655 TRY2P-201ENST00000448860 689 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AL356390.1-201ENST00000455684 397 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 CYCSP20-201ENST00000473154 315 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 RN7SL442P-201ENST00000473804 320 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AC109462.1-201ENST00000491087 368 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC008953.1-201ENST00000497334 318 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 PCBP2P3-201ENST00000509726 843 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 TXNP6-201ENST00000510190 310 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC006518.1-201ENST00000541449 943 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.97□□□□□ -1.77
GTF2A1P52655 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.97□□□□□ -1.77
GTF2A1P52655 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.97□□□□□ -1.77
GTF2A1P52655 AC090953.1-201ENST00000604305 1092 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 AC009163.6-201ENST00000612367 342 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.97□□□□□ -1.77
GTF2A1P52655 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 AL513302.2-201ENST00000562313 1842 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
GTF2A1P52655 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.77
GTF2A1P52655 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
GTF2A1P52655 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 RNA5SP123-201ENST00000363244 119 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
GTF2A1P52655 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
GTF2A1P52655 Z98745.1-201ENST00000402553 494 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 RN7SKP267-201ENST00000410381 285 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.96□□□□□ -1.78
GTF2A1P52655 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
GTF2A1P52655 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.96□□□□□ -1.78
GTF2A1P52655 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 RPL7L1P4-201ENST00000513004 707 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 Vault.1-201ENST00000516474 102 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 RN7SKP289-201ENST00000517244 295 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
GTF2A1P52655 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 MIR4458-201ENST00000578872 75 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.96□□□□□ -1.78
GTF2A1P52655 AC091905.4-201ENST00000623432 202 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 AC112694.2-201ENST00000623697 768 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 AP000843.1-201ENST00000624880 701 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 U3.53-201ENST00000628922 216 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
GTF2A1P52655 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
GTF2A1P52655 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
GTF2A1P52655 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 UBE3AP2-201ENST00000429033 2259 ntBASIC3.96□□□□□ -1.78
GTF2A1P52655 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
GTF2A1P52655 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GTF2A1P52655 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.95□□□□□ -1.78
GTF2A1P52655 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.95□□□□□ -1.78
GTF2A1P52655 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.95□□□□□ -1.78
GTF2A1P52655 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
GTF2A1P52655 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.95□□□□□ -1.78
GTF2A1P52655 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GTF2A1P52655 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GTF2A1P52655 SNORA48.8-201ENST00000391324 134 ntBASIC3.95□□□□□ -1.78
GTF2A1P52655 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms