Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.02□□□□□ -1.45
MRE11P49959 AL356473.1-201ENST00000406203 1408 ntBASIC6.02□□□□□ -1.45
MRE11P49959 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
MRE11P49959 Y_RNA.77-201ENST00000362962 107 ntBASIC6.02□□□□□ -1.45
MRE11P49959 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 MIR589-201ENST00000385238 99 ntBASIC6.02□□□□□ -1.45
MRE11P49959 RPL17P50-201ENST00000396131 546 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC233289.1-201ENST00000403700 508 ntBASIC6.02□□□□□ -1.45
MRE11P49959 SNORA11F-201ENST00000408237 128 ntBASIC6.02□□□□□ -1.45
MRE11P49959 BTF3P8-201ENST00000414577 526 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AL358176.3-201ENST00000420757 454 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AL133325.1-201ENST00000421090 382 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 MTCO2P16-201ENST00000436962 677 ntBASIC6.02□□□□□ -1.45
MRE11P49959 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.02□□□□□ -1.45
MRE11P49959 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.02□□□□□ -1.45
MRE11P49959 NECAP1P2-201ENST00000455668 727 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 AC107015.1-201ENST00000466902 747 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC103987.1-201ENST00000473394 348 ntBASIC6.02□□□□□ -1.45
MRE11P49959 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 RN7SL459P-201ENST00000481078 302 ntBASIC6.02□□□□□ -1.45
MRE11P49959 RN7SL57P-201ENST00000493687 290 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC023050.1-201ENST00000498198 304 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 AC011352.1-201ENST00000512300 793 ntBASIC6.02□□□□□ -1.45
MRE11P49959 RNA5SP249-201ENST00000516127 99 ntBASIC6.02□□□□□ -1.45
MRE11P49959 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.02□□□□□ -1.45
MRE11P49959 RPL23AP53-201ENST00000521854 457 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.02□□□□□ -1.45
MRE11P49959 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.02□□□□□ -1.45
MRE11P49959 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.02□□□□□ -1.45
MRE11P49959 AP005403.1-201ENST00000579720 229 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC063977.5-201ENST00000601044 974 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC097505.1-201ENST00000610199 565 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AL133243.1-201ENST00000614487 366 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC006338.2-201ENST00000616864 791 ntBASIC6.02□□□□□ -1.45
MRE11P49959 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 OR1S1-201ENST00000624470 978 ntBASIC6.02□□□□□ -1.45
MRE11P49959 AC091965.5-201ENST00000624785 342 ntBASIC6.02□□□□□ -1.45
MRE11P49959 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 PDZK1P1-202ENST00000425209 1350 ntBASIC6.02□□□□□ -1.45
MRE11P49959 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MRE11P49959 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.02□□□□□ -1.45
MRE11P49959 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
MRE11P49959 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.01□□□□□ -1.45
MRE11P49959 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
MRE11P49959 AC005294.1-201ENST00000355509 281 ntBASIC6.01□□□□□ -1.45
MRE11P49959 RNU1-32P-201ENST00000363937 159 ntBASIC6.01□□□□□ -1.45
MRE11P49959 SNORD116.1-201ENST00000365628 92 ntBASIC6.01□□□□□ -1.45
MRE11P49959 RPS3AP26-201ENST00000398259 784 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AL021407.1-201ENST00000404531 386 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 C1DP1-201ENST00000426049 402 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AC234781.2-201ENST00000426370 994 ntBASIC6.01□□□□□ -1.45
MRE11P49959 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 RPL7AP61-201ENST00000443410 636 ntBASIC6.01□□□□□ -1.45
MRE11P49959 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 OR51B8P-201ENST00000449892 769 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.01□□□□□ -1.45
MRE11P49959 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.01□□□□□ -1.45
MRE11P49959 AC119751.1-201ENST00000513357 765 ntBASIC6.01□□□□□ -1.45
MRE11P49959 TCP11X3P-202ENST00000514289 1254 ntBASIC6.01□□□□□ -1.45
MRE11P49959 SCARNA6.1-201ENST00000516989 238 ntBASIC6.01□□□□□ -1.45
MRE11P49959 IGKV2D-10-201ENST00000520194 281 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AP000859.1-201ENST00000525536 307 ntBASIC6.01□□□□□ -1.45
MRE11P49959 DEFB130C-202ENST00000530001 230 ntBASIC6.01□□□□□ -1.45
MRE11P49959 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.01□□□□□ -1.45
MRE11P49959 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
MRE11P49959 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MRE11P49959 RN7SL356P-201ENST00000582228 248 ntBASIC6.01□□□□□ -1.45
MRE11P49959 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
MRE11P49959 AC004987.4-201ENST00000603383 338 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms