Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 MIR6715B-201ENST00000637172 77 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 AC090971.4-201ENST00000560291 1800 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 MTND4P31-201ENST00000425607 1343 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 MIR133B-201ENST00000362210 119 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 RNU6-1339P-201ENST00000363574 91 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 snoZ40.1-201ENST00000364540 72 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 Z75741.2-201ENST00000417272 1167 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC093155.2-201ENST00000420734 937 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 RPS3P2-201ENST00000421346 701 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 RPS6P15-201ENST00000431996 751 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 TXNP5-201ENST00000441043 315 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 OR6K5P-201ENST00000447050 945 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AL035090.1-201ENST00000454835 332 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 GYG1P1-201ENST00000460864 698 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC073522.1-201ENST00000483312 377 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC034244.1-201ENST00000507687 207 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 RNA5SP392-201ENST00000516905 112 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC023632.1-201ENST00000518463 375 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 IGJP1-201ENST00000522682 475 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA1P49639 MTND6P33-201ENST00000571794 183 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AP005137.2-201ENST00000609238 400 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 TUSC7.1-201ENST00000610969 165 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA1P49639 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 AC004825.2-201ENST00000616634 455 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC118658.2-201ENST00000618697 459 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 AC074101.1-201ENST00000637861 241 ntBASIC4.17□□□□□ -1.74
HOXA1P49639 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA1P49639 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
HOXA1P49639 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HOXA1P49639 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA1P49639 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXA1P49639 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 AC134882.1-201ENST00000603738 1676 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXA1P49639 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms