Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TTC39DP-201ENST00000416781 1688 ntBASIC5.04□□□□□ -1.6
MMP13P45452 AC093775.1-201ENST00000624154 1868 ntBASIC5.04□□□□□ -1.6
MMP13P45452 AC104454.1-201ENST00000421341 1401 ntBASIC5.04□□□□□ -1.6
MMP13P45452 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.04□□□□□ -1.6
MMP13P45452 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.04□□□□□ -1.6
MMP13P45452 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 AL359922.3-201ENST00000624779 1670 ntBASIC5.03□□□□□ -1.6
MMP13P45452 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 RN7SKP95-201ENST00000362860 303 ntBASIC5.03□□□□□ -1.6
MMP13P45452 RNU6-1251P-201ENST00000364502 107 ntBASIC5.03□□□□□ -1.6
MMP13P45452 RNU4-72P-201ENST00000410754 173 ntBASIC5.03□□□□□ -1.6
MMP13P45452 RAP1BP1-201ENST00000412709 553 ntBASIC5.03□□□□□ -1.6
MMP13P45452 TATDN1P1-201ENST00000414123 891 ntBASIC5.03□□□□□ -1.6
MMP13P45452 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 GLUD1P9-201ENST00000420997 1173 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC011233.1-201ENST00000422812 283 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 AL353706.1-201ENST00000436728 494 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AL008629.1-201ENST00000438615 184 ntBASIC5.03□□□□□ -1.6
MMP13P45452 PTMAP6-201ENST00000439110 327 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AL138878.2-201ENST00000440581 1241 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 AL589880.1-201ENST00000448271 287 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AL627224.1-201ENST00000448334 444 ntBASIC5.03□□□□□ -1.6
MMP13P45452 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.03□□□□□ -1.6
MMP13P45452 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.03□□□□□ -1.6
MMP13P45452 snoU13.20-201ENST00000459180 104 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC005410.1-202ENST00000460347 485 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC004453.1-201ENST00000487895 408 ntBASIC5.03□□□□□ -1.6
MMP13P45452 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 AC034244.1-201ENST00000507687 207 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 SNORA3.4-201ENST00000515969 96 ntBASIC5.03□□□□□ -1.6
MMP13P45452 HMGB1P19-201ENST00000517578 577 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 AC087897.1-201ENST00000550134 156 ntBASIC5.03□□□□□ -1.6
MMP13P45452 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP13P45452 MIR4789-201ENST00000577469 82 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP13P45452 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 AC087783.2-201ENST00000605070 562 ntBASIC5.03□□□□□ -1.6
MMP13P45452 OR2AS2P-201ENST00000606902 342 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC091979.2-201ENST00000607514 214 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC211433.2-201ENST00000608433 387 ntBASIC5.03□□□□□ -1.6
MMP13P45452 MIR7155-201ENST00000615925 56 ntBASIC5.03□□□□□ -1.6
MMP13P45452 RMST_10.1-201ENST00000616309 154 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC068870.2-201ENST00000620635 389 ntBASIC5.03□□□□□ -1.6
MMP13P45452 AC005086.4-201ENST00000623065 213 ntBASIC5.03□□□□□ -1.6
MMP13P45452 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 AC027228.2-201ENST00000567141 2154 ntBASIC5.03□□□□□ -1.6
MMP13P45452 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ZNF90P1-201ENST00000480493 1951 ntBASIC5.03□□□□□ -1.6
MMP13P45452 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 AC009643.2-201ENST00000603543 1448 ntBASIC5.03□□□□□ -1.6
MMP13P45452 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP13P45452 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP13P45452 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP13P45452 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MMP13P45452 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MMP13P45452 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP13P45452 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 AL121950.1-201ENST00000624993 2077 ntBASIC5.02□□□□□ -1.61
MMP13P45452 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MMP13P45452 RN7SKP104-201ENST00000362605 328 ntBASIC5.02□□□□□ -1.61
MMP13P45452 RNA5SP123-201ENST00000363244 119 ntBASIC5.02□□□□□ -1.61
MMP13P45452 SNORD56.4-201ENST00000363883 71 ntBASIC5.02□□□□□ -1.61
MMP13P45452 BMS1P3-201ENST00000372011 932 ntBASIC5.02□□□□□ -1.61
MMP13P45452 AL645927.1-201ENST00000396783 406 ntBASIC5.02□□□□□ -1.61
MMP13P45452 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP13P45452 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP13P45452 AL356131.1-201ENST00000405826 414 ntBASIC5.02□□□□□ -1.61
MMP13P45452 AC092638.1-201ENST00000411966 1275 ntBASIC5.02□□□□□ -1.61
MMP13P45452 AL356320.2-201ENST00000417263 507 ntBASIC5.02□□□□□ -1.61
MMP13P45452 ELOCP9-201ENST00000418624 239 ntBASIC5.02□□□□□ -1.61
MMP13P45452 MFSD13B-201ENST00000420133 1290 ntBASIC5.02□□□□□ -1.61
MMP13P45452 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms