Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RPS20P21-201ENST00000466859 343 ntBASIC5.17□□□□□ -1.58
RFC4P35249 RN7SL809P-201ENST00000482040 297 ntBASIC5.17□□□□□ -1.58
RFC4P35249 RPS4XP18-201ENST00000495480 763 ntBASIC5.17□□□□□ -1.58
RFC4P35249 AC110768.1-201ENST00000509222 400 ntBASIC5.17□□□□□ -1.58
RFC4P35249 AC093853.1-201ENST00000515689 483 ntBASIC5.17□□□□□ -1.58
RFC4P35249 ADAM3B-201ENST00000569937 840 ntBASIC5.17□□□□□ -1.58
RFC4P35249 MIR5684-201ENST00000585074 65 ntBASIC5.17□□□□□ -1.58
RFC4P35249 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC4P35249 IMMP1LP1-201ENST00000605170 488 ntBASIC5.17□□□□□ -1.58
RFC4P35249 AC004241.3-201ENST00000611728 517 ntBASIC5.17□□□□□ -1.58
RFC4P35249 MIR8069-1-201ENST00000616627 86 ntBASIC5.17□□□□□ -1.58
RFC4P35249 MIR8069-2-201ENST00000621412 86 ntBASIC5.17□□□□□ -1.58
RFC4P35249 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC4P35249 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC4P35249 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 AC107027.3-201ENST00000565095 3473 ntBASIC5.16□□□□□ -1.58
RFC4P35249 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 AC114814.2-201ENST00000419195 485 ntBASIC5.16□□□□□ -1.58
RFC4P35249 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC4P35249 AL590609.2-201ENST00000421430 368 ntBASIC5.16□□□□□ -1.58
RFC4P35249 RBMY1KP-201ENST00000423480 476 ntBASIC5.16□□□□□ -1.58
RFC4P35249 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC4P35249 MTCO1P51-201ENST00000427672 1060 ntBASIC5.16□□□□□ -1.58
RFC4P35249 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC4P35249 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC4P35249 AC108022.1-201ENST00000493466 478 ntBASIC5.16□□□□□ -1.58
RFC4P35249 BNIP3P41-201ENST00000503774 571 ntBASIC5.16□□□□□ -1.58
RFC4P35249 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC4P35249 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.16□□□□□ -1.58
RFC4P35249 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC4P35249 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC4P35249 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 AC005972.3-201ENST00000606304 481 ntBASIC5.16□□□□□ -1.58
RFC4P35249 AC096577.2-201ENST00000611455 153 ntBASIC5.16□□□□□ -1.58
RFC4P35249 AC015871.5-202ENST00000623252 701 ntBASIC5.16□□□□□ -1.58
RFC4P35249 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RFC4P35249 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC4P35249 CASC19-204ENST00000641001 2055 ntBASIC5.16□□□□□ -1.58
RFC4P35249 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RFC4P35249 AL450326.2-201ENST00000421913 1962 ntBASIC5.15□□□□□ -1.58
RFC4P35249 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFC4P35249 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.15□□□□□ -1.58
RFC4P35249 AP001002.1-201ENST00000625148 1513 ntBASIC5.15□□□□□ -1.58
RFC4P35249 SNORA5A-201ENST00000384111 134 ntBASIC5.15□□□□□ -1.59
RFC4P35249 RNU6-178P-201ENST00000384631 104 ntBASIC5.15□□□□□ -1.59
RFC4P35249 NCSTNP1-201ENST00000406229 144 ntBASIC5.15□□□□□ -1.59
RFC4P35249 AL512430.2-201ENST00000406786 339 ntBASIC5.15□□□□□ -1.59
RFC4P35249 KRR1P1-201ENST00000419430 803 ntBASIC5.15□□□□□ -1.59
RFC4P35249 RPS11P1-201ENST00000451072 473 ntBASIC5.15□□□□□ -1.59
RFC4P35249 AC092691.2-201ENST00000461787 803 ntBASIC5.15□□□□□ -1.59
RFC4P35249 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.15□□□□□ -1.59
RFC4P35249 SCARNA13-201ENST00000516672 275 ntBASIC5.15□□□□□ -1.59
RFC4P35249 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.15□□□□□ -1.59
RFC4P35249 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC4P35249 AP000889.1-201ENST00000530968 660 ntBASIC5.15□□□□□ -1.59
RFC4P35249 AC107918.3-201ENST00000533272 382 ntBASIC5.15□□□□□ -1.59
RFC4P35249 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC4P35249 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC4P35249 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.15□□□□□ -1.59
RFC4P35249 AC015726.1-201ENST00000602353 681 ntBASIC5.15□□□□□ -1.59
RFC4P35249 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.15□□□□□ -1.59
RFC4P35249 AC022960.2-201ENST00000616300 666 ntBASIC5.15□□□□□ -1.59
RFC4P35249 AC019278.1-201ENST00000623516 479 ntBASIC5.15□□□□□ -1.59
RFC4P35249 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFC4P35249 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFC4P35249 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.15□□□□□ -1.59
RFC4P35249 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFC4P35249 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFC4P35249 MAPK10-304ENST00000641341 3984 ntBASIC5.14□□□□□ -1.59
RFC4P35249 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 U8.11-201ENST00000384699 133 ntBASIC5.14□□□□□ -1.59
RFC4P35249 U8.12-201ENST00000384701 133 ntBASIC5.14□□□□□ -1.59
RFC4P35249 MIR491-201ENST00000384877 84 ntBASIC5.14□□□□□ -1.59
RFC4P35249 MIR34B-201ENST00000385076 84 ntBASIC5.14□□□□□ -1.59
RFC4P35249 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFC4P35249 AC009302.1-201ENST00000417147 390 ntBASIC5.14□□□□□ -1.59
RFC4P35249 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.14□□□□□ -1.59
RFC4P35249 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.14□□□□□ -1.59
RFC4P35249 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms