Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 AC011155.1-201ENST00000316512 456 ntBASIC5□□□□□ -1.61
HOXA11P31270 MIR16-2-201ENST00000362117 81 ntBASIC5□□□□□ -1.61
HOXA11P31270 RNU4-28P-201ENST00000364739 141 ntBASIC5□□□□□ -1.61
HOXA11P31270 SDHCP2-201ENST00000398565 501 ntBASIC5□□□□□ -1.61
HOXA11P31270 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 AL365338.1-201ENST00000422282 858 ntBASIC5□□□□□ -1.61
HOXA11P31270 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 RPL12P34-201ENST00000424532 479 ntBASIC5□□□□□ -1.61
HOXA11P31270 AP001324.1-201ENST00000428553 399 ntBASIC5□□□□□ -1.61
HOXA11P31270 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 RPS7P2-201ENST00000435134 607 ntBASIC5□□□□□ -1.61
HOXA11P31270 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5□□□□□ -1.61
HOXA11P31270 ARF4P4-201ENST00000439608 520 ntBASIC5□□□□□ -1.61
HOXA11P31270 MTCYBP12-201ENST00000440559 1134 ntBASIC5□□□□□ -1.61
HOXA11P31270 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5□□□□□ -1.61
HOXA11P31270 AL358794.1-201ENST00000445689 381 ntBASIC5□□□□□ -1.61
HOXA11P31270 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 HMGB1P26-201ENST00000452520 628 ntBASIC5□□□□□ -1.61
HOXA11P31270 Z95152.1-201ENST00000453556 656 ntBASIC5□□□□□ -1.61
HOXA11P31270 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 PSMC1P13-201ENST00000458195 985 ntBASIC5□□□□□ -1.61
HOXA11P31270 RNU6-1218P-201ENST00000458990 108 ntBASIC5□□□□□ -1.61
HOXA11P31270 RN7SL385P-201ENST00000468873 276 ntBASIC5□□□□□ -1.61
HOXA11P31270 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5□□□□□ -1.61
HOXA11P31270 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 AC098799.3-201ENST00000506095 438 ntBASIC5□□□□□ -1.61
HOXA11P31270 SUMO2P5-201ENST00000506790 245 ntBASIC5□□□□□ -1.61
HOXA11P31270 AC021146.7-201ENST00000509604 775 ntBASIC5□□□□□ -1.61
HOXA11P31270 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 NOP56P3-201ENST00000549457 385 ntBASIC5□□□□□ -1.61
HOXA11P31270 AC090312.1-201ENST00000580637 348 ntBASIC5□□□□□ -1.61
HOXA11P31270 AP005262.1-201ENST00000582646 997 ntBASIC5□□□□□ -1.61
HOXA11P31270 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5□□□□□ -1.61
HOXA11P31270 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 PSMA6P4-201ENST00000603247 718 ntBASIC5□□□□□ -1.61
HOXA11P31270 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 AL391684.1-202ENST00000641293 1636 ntBASIC5□□□□□ -1.61
HOXA11P31270 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5□□□□□ -1.61
HOXA11P31270 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA11P31270 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5□□□□□ -1.61
HOXA11P31270 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC108751.5-201ENST00000492880 1336 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AL136164.3-201ENST00000624429 3978 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXA11P31270 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA11P31270 CCT8P1-201ENST00000413611 1657 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 VN2R3P-201ENST00000422626 1412 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA11P31270 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 DHX9P1-201ENST00000436565 3076 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA11P31270 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA11P31270 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXA11P31270 RNU6-666P-201ENST00000363499 107 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 RNU6-146P-201ENST00000384602 108 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 MIR320B1-201ENST00000390209 79 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC073136.2-201ENST00000417282 849 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC007563.3-201ENST00000433233 371 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AC073143.1-201ENST00000436316 395 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 AL357520.1-201ENST00000441557 453 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 HMGB3P9-201ENST00000441799 583 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 TCEA1P3-201ENST00000443005 880 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 MTND2P22-201ENST00000444325 1033 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AC104651.2-201ENST00000447549 528 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 TPT1P12-201ENST00000448968 492 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 RPL23AP23-201ENST00000452590 471 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXA11P31270 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 CYCSP20-201ENST00000473154 315 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AP000563.1-201ENST00000490865 758 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 HMGB1P3-201ENST00000502802 616 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA11P31270 OR4U1P-201ENST00000554958 912 ntBASIC4.99□□□□□ -1.61
HOXA11P31270 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA11P31270 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms