Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
XRCC1P18887 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.3□□□□□ -1.72
XRCC1P18887 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 DDX6P1-205ENST00000441966 1436 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
XRCC1P18887 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.29□□□□□ -1.72
XRCC1P18887 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
XRCC1P18887 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 MIR331-201ENST00000362302 94 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 OR6C69P-201ENST00000394268 893 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 AL049693.1-201ENST00000402760 611 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 AC234779.1-201ENST00000425910 285 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 NANOGP6-201ENST00000429190 847 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 ACTR3P2-201ENST00000439585 1257 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.29□□□□□ -1.72
XRCC1P18887 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 MTND5P8-201ENST00000449817 1083 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 AC109327.1-201ENST00000471666 403 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.29□□□□□ -1.72
XRCC1P18887 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 KPNA2P3-201ENST00000584190 848 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.29□□□□□ -1.72
XRCC1P18887 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.29□□□□□ -1.72
XRCC1P18887 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
XRCC1P18887 AC010329.2-201ENST00000595195 2737 ntBASIC4.29□□□□□ -1.72
XRCC1P18887 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
XRCC1P18887 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
XRCC1P18887 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
XRCC1P18887 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
XRCC1P18887 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 AC092079.1-201ENST00000558620 1985 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.28□□□□□ -1.72
XRCC1P18887 CCNB2P1-201ENST00000399411 1150 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 HSPD1P16-201ENST00000402302 394 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 RANP4-201ENST00000413361 655 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 BX119904.1-201ENST00000432026 348 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 NDUFA5P10-201ENST00000432147 357 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 RPEP2-201ENST00000432149 701 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.28□□□□□ -1.72
XRCC1P18887 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 CASP3P1-201ENST00000446037 609 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.28□□□□□ -1.72
XRCC1P18887 AL162388.1-201ENST00000450912 352 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 DDX39BP2-208ENST00000453923 258 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 APOOP2-201ENST00000461561 539 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AC092691.2-201ENST00000461787 803 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 PPIAP21-201ENST00000464473 501 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.28□□□□□ -1.72
XRCC1P18887 AC091167.1-201ENST00000492017 396 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 PPM1AP1-201ENST00000502740 1135 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.28□□□□□ -1.72
XRCC1P18887 AC090515.3-201ENST00000560431 315 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 MIR3939-201ENST00000582614 106 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.28□□□□□ -1.72
XRCC1P18887 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.28□□□□□ -1.72
XRCC1P18887 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 AP000843.1-201ENST00000624880 701 ntBASIC4.28□□□□□ -1.72
XRCC1P18887 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.28□□□□□ -1.72
XRCC1P18887 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.28□□□□□ -1.72
XRCC1P18887 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
XRCC1P18887 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.28□□□□□ -1.72
XRCC1P18887 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms