Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.04□□□□□ -1.6
MMP3P08254 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 AC020699.1-201ENST00000505161 445 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 IGHV3-63-201ENST00000518422 341 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.04□□□□□ -1.6
MMP3P08254 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.04□□□□□ -1.6
MMP3P08254 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 AL132857.1-201ENST00000555180 708 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.04□□□□□ -1.6
MMP3P08254 AC007224.1-201ENST00000564410 144 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 IPO5P1-202ENST00000600039 287 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC067959.1-201ENST00000604334 379 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL450336.1-201ENST00000605180 586 ntBASIC5.04□□□□□ -1.6
MMP3P08254 RNU4-5P-201ENST00000607255 135 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL158062.1-201ENST00000619632 745 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC022079.2-201ENST00000619739 566 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC006065.6-201ENST00000625201 545 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC083865.1-201ENST00000636634 831 ntBASIC5.04□□□□□ -1.6
MMP3P08254 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
MMP3P08254 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 AC008033.1-201ENST00000216407 1162 ntBASIC5.03□□□□□ -1.6
MMP3P08254 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
MMP3P08254 RNU5B-1-201ENST00000363286 116 ntBASIC5.03□□□□□ -1.6
MMP3P08254 ANAPC10P1-201ENST00000395991 556 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AL080315.1-201ENST00000406055 466 ntBASIC5.03□□□□□ -1.6
MMP3P08254 NANOGP5-201ENST00000424456 877 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 AC115285.1-201ENST00000424879 736 ntBASIC5.03□□□□□ -1.6
MMP3P08254 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 AC000041.1-201ENST00000439655 175 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP3P08254 AC098826.2-201ENST00000452011 651 ntBASIC5.03□□□□□ -1.6
MMP3P08254 CALM1P2-201ENST00000452941 448 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 MTCO1P35-201ENST00000515270 228 ntBASIC5.03□□□□□ -1.6
MMP3P08254 MRPL49P2-201ENST00000521066 465 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP3P08254 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 OR8A2P-201ENST00000528631 952 ntBASIC5.03□□□□□ -1.6
MMP3P08254 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP3P08254 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP3P08254 LRRC34P1-201ENST00000542742 915 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AP003717.3-201ENST00000544832 1180 ntBASIC5.03□□□□□ -1.6
MMP3P08254 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP3P08254 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP3P08254 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP3P08254 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.03□□□□□ -1.6
MMP3P08254 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.03□□□□□ -1.6
MMP3P08254 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
MMP3P08254 AC132825.7-201ENST00000638744 335 ntBASIC5.03□□□□□ -1.6
MMP3P08254 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MMP3P08254 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MMP3P08254 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 LINC00622-201ENST00000562811 1570 ntBASIC5.03□□□□□ -1.6
MMP3P08254 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
MMP3P08254 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 AC011755.1-201ENST00000623763 2049 ntBASIC5.02□□□□□ -1.61
MMP3P08254 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 AL359922.3-201ENST00000624779 1670 ntBASIC5.02□□□□□ -1.61
MMP3P08254 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.02□□□□□ -1.61
MMP3P08254 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.02□□□□□ -1.61
MMP3P08254 Z95331.1-201ENST00000623075 23112 ntBASIC5.02□□□□□ -1.61
MMP3P08254 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 RNA5SP28-201ENST00000363841 119 ntBASIC5.02□□□□□ -1.61
MMP3P08254 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MMP3P08254 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 MIR142-201ENST00000384835 87 ntBASIC5.02□□□□□ -1.61
MMP3P08254 RNA5SP296-201ENST00000410523 111 ntBASIC5.02□□□□□ -1.61
MMP3P08254 RPL23AP26-201ENST00000412728 464 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.02□□□□□ -1.61
MMP3P08254 SNRPFP1-201ENST00000414761 252 ntBASIC5.02□□□□□ -1.61
MMP3P08254 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms