Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.67□□□□□ -1.82
SPTA1P02549 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPTA1P02549 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC3.67□□□□□ -1.82
SPTA1P02549 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SPTA1P02549 SNORA3.3-201ENST00000408712 125 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.67□□□□□ -1.82
SPTA1P02549 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.67□□□□□ -1.82
SPTA1P02549 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.67□□□□□ -1.82
SPTA1P02549 AC092691.2-201ENST00000461787 803 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 RPS29P19-201ENST00000479709 171 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 OR7E13P-201ENST00000526052 910 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.67□□□□□ -1.82
SPTA1P02549 AC110743.1-201ENST00000584870 478 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 AC010201.1-201ENST00000605051 540 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 AL033523.1-201ENST00000605153 153 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 AC008966.2-201ENST00000606157 453 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.67□□□□□ -1.82
SPTA1P02549 AC090246.1-201ENST00000616499 426 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPTA1P02549 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SPTA1P02549 CEP170P1-201ENST00000502249 4587 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC093755.1-201ENST00000512950 1023 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 RNA5SP497-201ENST00000516081 97 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 RNA5SP116-201ENST00000516132 98 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.66□□□□□ -1.82
SPTA1P02549 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 SRP72P2-201ENST00000344851 1979 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 HMGB3P19-201ENST00000403971 560 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.66□□□□□ -1.82
SPTA1P02549 AL831737.1-201ENST00000441288 271 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 BTF3P6-201ENST00000448054 499 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.66□□□□□ -1.82
SPTA1P02549 AC097462.2-201ENST00000504623 481 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.66□□□□□ -1.82
SPTA1P02549 HIGD1AP3-201ENST00000515857 278 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 RNU6-237P-201ENST00000515985 71 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.66□□□□□ -1.82
SPTA1P02549 AL391497.1-201ENST00000608671 547 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.66□□□□□ -1.82
SPTA1P02549 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPTA1P02549 LINC01109-201ENST00000603837 3081 ntBASIC3.66□□□□□ -1.82
SPTA1P02549 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SPTA1P02549 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SPTA1P02549 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 AL391219.1-201ENST00000422570 483 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 AC008065.1-201ENST00000428525 348 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 CEACAMP1-201ENST00000434624 1035 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.65□□□□□ -1.82
SPTA1P02549 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 RPL7P22-201ENST00000466005 733 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 CYCSP28-201ENST00000534284 321 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.65□□□□□ -1.82
SPTA1P02549 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.65□□□□□ -1.82
SPTA1P02549 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.65□□□□□ -1.82
SPTA1P02549 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.65□□□□□ -1.82
SPTA1P02549 AL137843.1-201ENST00000605078 385 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SPTA1P02549 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 AC011503.2-201ENST00000594230 1500 ntBASIC3.65□□□□□ -1.82
SPTA1P02549 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.65□□□□□ -1.82
SPTA1P02549 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SPTA1P02549 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SPTA1P02549 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.65□□□□□ -1.83
SPTA1P02549 AC073136.1-201ENST00000449426 2884 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 UBE2V1P2-201ENST00000397758 440 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 UBE2V1P3-201ENST00000439651 417 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 RAD23BP3-201ENST00000454157 1152 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 AC090686.1-201ENST00000481577 749 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.65□□□□□ -1.83
SPTA1P02549 RN7SKP141-201ENST00000516167 338 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 Vault.1-201ENST00000516474 102 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.65□□□□□ -1.83
SPTA1P02549 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.65□□□□□ -1.83
SPTA1P02549 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.65□□□□□ -1.83
SPTA1P02549 AC012417.1-201ENST00000582307 1039 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SPTA1P02549 AC130352.1-201ENST00000602979 661 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.65□□□□□ -1.83
SPTA1P02549 AC006386.2-201ENST00000624491 75 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 AC012005.1-201ENST00000624575 75 ntBASIC3.65□□□□□ -1.83
SPTA1P02549 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SPTA1P02549 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 CCAT2-201ENST00000630920 1752 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms