Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.73□□□□□ -2.13
USH2AO75445 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC1.73□□□□□ -2.13
USH2AO75445 AC090312.2-201ENST00000582687 378 ntBASIC1.73□□□□□ -2.13
USH2AO75445 QTRT1P1-201ENST00000604344 1078 ntBASIC1.73□□□□□ -2.13
USH2AO75445 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC1.73□□□□□ -2.13
USH2AO75445 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC1.73□□□□□ -2.13
USH2AO75445 BNIP3P41-202ENST00000616656 861 ntBASIC1.73□□□□□ -2.13
USH2AO75445 AC019278.1-201ENST00000623516 479 ntBASIC1.73□□□□□ -2.13
USH2AO75445 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC1.73□□□□□ -2.13
USH2AO75445 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 AC008124.1-201ENST00000609803 9730 ntBASIC1.73□□□□□ -2.13
USH2AO75445 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 AL034370.1-201ENST00000397254 1590 ntBASIC1.73□□□□□ -2.13
USH2AO75445 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.73□□□□□ -2.13
USH2AO75445 ARHGAP42P3-201ENST00000443989 2508 ntBASIC1.73□□□□□ -2.13
USH2AO75445 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
USH2AO75445 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.73□□□□□ -2.13
USH2AO75445 EIF4HP2-201ENST00000424380 563 ntBASIC1.73□□□□□ -2.13
USH2AO75445 RPL21P112-201ENST00000434403 463 ntBASIC1.73□□□□□ -2.13
USH2AO75445 RPL23AP46-201ENST00000438548 490 ntBASIC1.73□□□□□ -2.13
USH2AO75445 NPM1P13-201ENST00000452663 865 ntBASIC1.73□□□□□ -2.13
USH2AO75445 SUN3-208ENST00000453192 801 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 RPL7P48-201ENST00000461513 746 ntBASIC1.73□□□□□ -2.13
USH2AO75445 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.73□□□□□ -2.13
USH2AO75445 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.73□□□□□ -2.13
USH2AO75445 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.73□□□□□ -2.13
USH2AO75445 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.73□□□□□ -2.13
USH2AO75445 AC010149.2-201ENST00000637608 315 ntBASIC1.73□□□□□ -2.13
USH2AO75445 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USH2AO75445 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 AP000542.2-201ENST00000623199 6179 ntBASIC1.72□□□□□ -2.13
USH2AO75445 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 AL033543.1-201ENST00000623440 13454 ntBASIC1.72□□□□□ -2.13
USH2AO75445 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 AL359693.1-201ENST00000614959 2407 ntBASIC1.72□□□□□ -2.13
USH2AO75445 SNORD66.1-201ENST00000391230 76 ntBASIC1.72□□□□□ -2.13
USH2AO75445 PGBD4P8-201ENST00000412993 562 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC138761.5-201ENST00000433967 325 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC005019.1-201ENST00000436455 431 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.72□□□□□ -2.13
USH2AO75445 AC111000.6-201ENST00000514471 709 ntBASIC1.72□□□□□ -2.13
USH2AO75445 IGHV3-32-201ENST00000519182 355 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC084759.1-201ENST00000561168 290 ntBASIC1.72□□□□□ -2.13
USH2AO75445 RPL23AP87-202ENST00000573039 466 ntBASIC1.72□□□□□ -2.13
USH2AO75445 LARP7P3-201ENST00000579888 337 ntBASIC1.72□□□□□ -2.13
USH2AO75445 Z95327.3-201ENST00000610385 572 ntBASIC1.72□□□□□ -2.13
USH2AO75445 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 AL117378.2-201ENST00000622916 1337 ntBASIC1.72□□□□□ -2.13
USH2AO75445 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
USH2AO75445 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USH2AO75445 RPL21P91-201ENST00000429231 479 ntBASIC1.72□□□□□ -2.13
USH2AO75445 BX276092.6-201ENST00000430476 250 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AF228730.2-201ENST00000438784 848 ntBASIC1.72□□□□□ -2.13
USH2AO75445 BX276092.8-201ENST00000455722 250 ntBASIC1.72□□□□□ -2.13
USH2AO75445 RPS17P11-201ENST00000474297 293 ntBASIC1.72□□□□□ -2.13
USH2AO75445 OR2A20P-203ENST00000498397 1268 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC091826.1-201ENST00000514065 313 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC1.72□□□□□ -2.13
USH2AO75445 AC012417.1-201ENST00000582307 1039 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC1.72□□□□□ -2.13
USH2AO75445 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USH2AO75445 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 OR5J1P-201ENST00000313544 939 ntBASIC1.72□□□□□ -2.13
USH2AO75445 RNA5SP51-201ENST00000364750 119 ntBASIC1.72□□□□□ -2.13
USH2AO75445 SNORD96B-201ENST00000386148 79 ntBASIC1.72□□□□□ -2.13
USH2AO75445 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC1.72□□□□□ -2.13
USH2AO75445 IFNA11P-201ENST00000446352 526 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC1.72□□□□□ -2.13
USH2AO75445 AC133134.1-201ENST00000466800 359 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC108145.1-201ENST00000503770 153 ntBASIC1.72□□□□□ -2.13
USH2AO75445 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.72□□□□□ -2.13
USH2AO75445 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms