Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL591926.8-201ENST00000616876 211 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AL022401.1-201ENST00000619498 108 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC012414.7-202ENST00000622705 1090 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 NAMPTP1-201ENST00000440465 2514 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 ECM1P2-201ENST00000503354 1577 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 CDC27P2-201ENST00000425026 1922 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 TTC39DP-201ENST00000416781 1688 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
LMX1BO60663 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 RNU1-32P-201ENST00000363937 159 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 OR13C3-201ENST00000374781 1108 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.26□□□□□ -1.73
LMX1BO60663 RNU6-398P-201ENST00000384143 109 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 SNORA66-201ENST00000384792 133 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 SFR1P1-201ENST00000403720 688 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MIR1302-8-201ENST00000408342 128 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MIR1271-201ENST00000408537 86 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 RNU2-22P-201ENST00000411266 212 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.26□□□□□ -1.73
LMX1BO60663 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 EEF1A1P39-201ENST00000440791 250 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 HSFY3P-201ENST00000444242 1191 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC112498.1-201ENST00000444401 332 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 KNOP1P3-201ENST00000446933 426 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 TPT1P12-201ENST00000448968 492 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 OR51B8P-201ENST00000449892 769 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.26□□□□□ -1.73
LMX1BO60663 RPL5P22-201ENST00000480199 884 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MTND2P14-201ENST00000482139 351 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.26□□□□□ -1.73
LMX1BO60663 RPS3AP22-201ENST00000488297 769 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.26□□□□□ -1.73
LMX1BO60663 AC034244.1-201ENST00000507687 207 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC008837.1-201ENST00000511513 412 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 RNU6-1129P-201ENST00000515964 104 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 RNU6-513P-201ENST00000516104 104 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 RNA5SP43-201ENST00000516559 110 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MTCYBP19-201ENST00000517463 1124 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 OR8A2P-201ENST00000528631 952 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 LRRC6P1-201ENST00000532188 885 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 OR5AN2P-201ENST00000534535 896 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 AC068993.1-201ENST00000546724 589 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.26□□□□□ -1.73
LMX1BO60663 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 MTND4LP24-201ENST00000572277 291 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MTCYBP33-201ENST00000575007 1130 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MIR4737-201ENST00000583979 81 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC068020.1-201ENST00000594215 661 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.26□□□□□ -1.73
LMX1BO60663 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.26□□□□□ -1.73
LMX1BO60663 AC130352.1-201ENST00000602979 661 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 OR2BH1P-201ENST00000608850 864 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MIR8069-1-201ENST00000616627 86 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC022106.2-201ENST00000620114 757 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 MIR8069-2-201ENST00000621412 86 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC015804.1-201ENST00000622935 435 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AC067852.7-201ENST00000623270 535 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 AP001642.1-201ENST00000624727 2117 ntBASIC4.26□□□□□ -1.73
LMX1BO60663 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LMX1BO60663 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LMX1BO60663 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.26□□□□□ -1.73
LMX1BO60663 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMX1BO60663 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LMX1BO60663 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms