Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC025263.3-201ENST00000622965 1396 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC096656.1-201ENST00000623826 1364 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC008758.3-201ENST00000507003 1829 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 AC103591.2-201ENST00000265259 766 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 NACA3P-201ENST00000359690 648 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 RNU4-40P-201ENST00000364351 143 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 MIR16-1-201ENST00000385271 89 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC016769.2-201ENST00000414815 475 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 CNOT7P1-201ENST00000429006 852 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 MTND5P25-201ENST00000430499 799 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.42□□□□□ -1.7
ZIC3O60481 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 RPL21P110-201ENST00000433345 446 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 RPL35AP21-201ENST00000437667 333 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 COX7BP2-201ENST00000437976 242 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 EXTL2P1-201ENST00000446218 416 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 Z83846.1-201ENST00000446798 265 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 SLC25A18P1-201ENST00000449385 454 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 RHEBP2-201ENST00000450289 600 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC234781.3-201ENST00000452540 973 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AL356981.1-201ENST00000454879 684 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AURKAPS2-201ENST00000454983 333 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC005912.1-201ENST00000495392 255 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.42□□□□□ -1.7
ZIC3O60481 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 IGKV2-36-201ENST00000519999 223 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 AADACP1-206ENST00000561502 1193 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 MIR3912-201ENST00000577566 105 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC090312.2-201ENST00000582687 378 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 SGO1P1-201ENST00000603525 1447 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 TUSC7.1-201ENST00000610969 165 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC107075.1-201ENST00000613695 314 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 AC091953.3-201ENST00000623220 236 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC011755.1-201ENST00000623763 2049 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 MIR1322-201ENST00000638013 71 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 AP005901.5-201ENST00000545779 1796 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.42□□□□□ -1.7
ZIC3O60481 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
ZIC3O60481 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ZIC3O60481 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZIC3O60481 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.42□□□□□ -1.7
ZIC3O60481 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 AC027228.2-201ENST00000567141 2154 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 TCP11X1-202ENST00000622971 1372 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 AC073429.2-201ENST00000569694 1444 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 RNA5SP191-201ENST00000362585 102 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 RNA5SP113-201ENST00000410486 84 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 AC007738.1-201ENST00000413892 348 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC073069.1-201ENST00000428657 441 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.41□□□□□ -1.7
ZIC3O60481 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 AL049745.1-201ENST00000433953 286 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AL031663.1-201ENST00000437445 219 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC006466.1-201ENST00000438721 289 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 FGF7P5-201ENST00000441829 291 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms