Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.74□□□□□ -1.65
LDB2O43679 BX649567.1-201ENST00000642071 1134 ntBASIC4.74□□□□□ -1.65
LDB2O43679 AC093775.1-201ENST00000624154 1868 ntBASIC4.74□□□□□ -1.65
LDB2O43679 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LDB2O43679 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
LDB2O43679 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LDB2O43679 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDB2O43679 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LDB2O43679 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
LDB2O43679 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 AC073055.1-201ENST00000456901 1621 ntBASIC4.73□□□□□ -1.65
LDB2O43679 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 AC027228.2-201ENST00000567141 2154 ntBASIC4.73□□□□□ -1.65
LDB2O43679 RNU4-92P-201ENST00000363783 136 ntBASIC4.73□□□□□ -1.65
LDB2O43679 Y_RNA.472-201ENST00000384322 102 ntBASIC4.73□□□□□ -1.65
LDB2O43679 RNU6-1242P-201ENST00000391052 103 ntBASIC4.73□□□□□ -1.65
LDB2O43679 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 HMGB3P18-201ENST00000406327 590 ntBASIC4.73□□□□□ -1.65
LDB2O43679 RN7SKP100-201ENST00000411258 284 ntBASIC4.73□□□□□ -1.65
LDB2O43679 BTF3P8-201ENST00000414577 526 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 MTCO1P52-201ENST00000433928 531 ntBASIC4.73□□□□□ -1.65
LDB2O43679 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 SETD6P1-201ENST00000444575 317 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 OR1H1P-201ENST00000448731 937 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 CYCSP34-201ENST00000458172 304 ntBASIC4.73□□□□□ -1.65
LDB2O43679 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.73□□□□□ -1.65
LDB2O43679 AC073358.1-201ENST00000505671 684 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC105313.1-201ENST00000509121 353 ntBASIC4.73□□□□□ -1.65
LDB2O43679 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 RPS27AP18-201ENST00000515536 459 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 HIGD1AP5-201ENST00000529959 259 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 AC068993.1-201ENST00000546724 589 ntBASIC4.73□□□□□ -1.65
LDB2O43679 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 AC105129.1-201ENST00000560250 297 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC018552.1-201ENST00000562099 811 ntBASIC4.73□□□□□ -1.65
LDB2O43679 ATP5F1P7-201ENST00000567330 760 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.73□□□□□ -1.65
LDB2O43679 MIR4737-201ENST00000583979 81 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC061975.8-201ENST00000587058 721 ntBASIC4.73□□□□□ -1.65
LDB2O43679 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.73□□□□□ -1.65
LDB2O43679 AC013444.2-201ENST00000603317 787 ntBASIC4.73□□□□□ -1.65
LDB2O43679 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.73□□□□□ -1.65
LDB2O43679 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.73□□□□□ -1.65
LDB2O43679 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
LDB2O43679 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDB2O43679 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
LDB2O43679 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDB2O43679 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDB2O43679 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDB2O43679 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.72□□□□□ -1.65
LDB2O43679 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.72□□□□□ -1.65
LDB2O43679 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDB2O43679 RNU6-666P-201ENST00000363499 107 ntBASIC4.72□□□□□ -1.65
LDB2O43679 UBBP2-201ENST00000376781 231 ntBASIC4.72□□□□□ -1.65
LDB2O43679 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.72□□□□□ -1.65
LDB2O43679 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LDB2O43679 RNU6-532P-201ENST00000384318 107 ntBASIC4.72□□□□□ -1.65
LDB2O43679 RNU6-185P-201ENST00000384421 107 ntBASIC4.72□□□□□ -1.65
LDB2O43679 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LDB2O43679 CYB5AP4-201ENST00000396692 399 ntBASIC4.72□□□□□ -1.65
LDB2O43679 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.72□□□□□ -1.65
LDB2O43679 AL080315.1-201ENST00000406055 466 ntBASIC4.72□□□□□ -1.65
LDB2O43679 MIR1271-201ENST00000408537 86 ntBASIC4.72□□□□□ -1.65
LDB2O43679 RNA5SP498-201ENST00000411342 120 ntBASIC4.72□□□□□ -1.65
LDB2O43679 AC105402.1-201ENST00000413336 545 ntBASIC4.72□□□□□ -1.65
LDB2O43679 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.72□□□□□ -1.65
LDB2O43679 GTF2IP2-201ENST00000424290 697 ntBASIC4.72□□□□□ -1.65
LDB2O43679 DPY19L1P2-201ENST00000426647 915 ntBASIC4.72□□□□□ -1.65
LDB2O43679 USP9YP9-201ENST00000429406 715 ntBASIC4.72□□□□□ -1.65
LDB2O43679 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms