Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.2□□□□□ -1.74
LSM1O15116 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.2□□□□□ -1.74
LSM1O15116 IFITM8P-201ENST00000522529 394 ntBASIC4.2□□□□□ -1.74
LSM1O15116 OR5M7P-201ENST00000526140 972 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 AC008083.2-201ENST00000546707 476 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.2□□□□□ -1.74
LSM1O15116 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 AC233309.1-201ENST00000619522 751 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.2□□□□□ -1.74
LSM1O15116 AL136964.1-201ENST00000622038 2990 ntBASIC4.2□□□□□ -1.74
LSM1O15116 MIR6719-201ENST00000622428 87 ntBASIC4.2□□□□□ -1.74
LSM1O15116 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 AC017002.4-201ENST00000604721 1525 ntBASIC4.2□□□□□ -1.74
LSM1O15116 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LSM1O15116 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LSM1O15116 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
LSM1O15116 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LSM1O15116 RNU1-130P-201ENST00000363930 160 ntBASIC4.19□□□□□ -1.74
LSM1O15116 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.19□□□□□ -1.74
LSM1O15116 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LSM1O15116 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
LSM1O15116 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 SNRPFP1-201ENST00000414761 252 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AL356806.1-201ENST00000422524 916 ntBASIC4.19□□□□□ -1.74
LSM1O15116 NPM1P24-201ENST00000428039 894 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC017083.1-201ENST00000428093 483 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AL162591.2-201ENST00000449634 317 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC053481.1-201ENST00000467217 306 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.19□□□□□ -1.74
LSM1O15116 EIF1AXP2-201ENST00000555940 413 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.19□□□□□ -1.74
LSM1O15116 MIR4436B2-201ENST00000581415 91 ntBASIC4.19□□□□□ -1.74
LSM1O15116 MIR4436B1-201ENST00000583272 91 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.19□□□□□ -1.74
LSM1O15116 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LSM1O15116 AP001160.4-201ENST00000596971 382 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC068790.7-201ENST00000602347 528 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC079587.1-201ENST00000603846 277 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AC013244.1-201ENST00000604279 193 ntBASIC4.19□□□□□ -1.74
LSM1O15116 FAM25E-202ENST00000608562 189 ntBASIC4.19□□□□□ -1.74
LSM1O15116 AL049536.1-201ENST00000625043 744 ntBASIC4.19□□□□□ -1.74
LSM1O15116 FP325313.1-201ENST00000638228 703 ntBASIC4.19□□□□□ -1.74
LSM1O15116 MFSD8-242ENST00000641690 4199 ntBASIC4.19□□□□□ -1.74
LSM1O15116 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LSM1O15116 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.19□□□□□ -1.74
LSM1O15116 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.19□□□□□ -1.74
LSM1O15116 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LSM1O15116 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LSM1O15116 AC025031.4-201ENST00000621248 3271 ntBASIC4.19□□□□□ -1.74
LSM1O15116 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LSM1O15116 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM1O15116 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM1O15116 AC097374.1-203ENST00000400783 485 ntBASIC4.18□□□□□ -1.74
LSM1O15116 Z98941.1-201ENST00000407764 100 ntBASIC4.18□□□□□ -1.74
LSM1O15116 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 RN7SKP278-201ENST00000410504 342 ntBASIC4.18□□□□□ -1.74
LSM1O15116 RN7SKP56-201ENST00000410513 331 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 RPL26P37-201ENST00000411983 438 ntBASIC4.18□□□□□ -1.74
LSM1O15116 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LSM1O15116 RPL7AP25-201ENST00000423357 805 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.18□□□□□ -1.74
LSM1O15116 NDUFA5P1-201ENST00000433858 341 ntBASIC4.18□□□□□ -1.74
LSM1O15116 DHFRP3-201ENST00000455595 559 ntBASIC4.18□□□□□ -1.74
LSM1O15116 PPIAP15-201ENST00000479662 484 ntBASIC4.18□□□□□ -1.74
LSM1O15116 RN7SL812P-201ENST00000493791 279 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC105233.1-201ENST00000498840 781 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.18□□□□□ -1.74
LSM1O15116 ATP1B1P1-201ENST00000509767 915 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.18□□□□□ -1.74
LSM1O15116 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.18□□□□□ -1.74
LSM1O15116 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.18□□□□□ -1.74
LSM1O15116 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.18□□□□□ -1.74
LSM1O15116 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM1O15116 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LSM1O15116 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 OR4C2P-201ENST00000530855 1064 ntBASIC4.18□□□□□ -1.74
LSM1O15116 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.18□□□□□ -1.74
LSM1O15116 AC021483.2-201ENST00000567415 758 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms