Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 EIF2S2P2-201ENST00000447161 982 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 AL500522.2-201ENST00000448562 343 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 TPT1P13-201ENST00000449760 499 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AL162388.1-201ENST00000450912 352 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 HSPE1P22-201ENST00000456856 327 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC006463.2-201ENST00000473326 348 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 RN7SL604P-201ENST00000492589 296 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC005798.1-201ENST00000513715 387 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.37□□□□□ -1.87
SDCBPO00560 RAB9BP1-201ENST00000519581 626 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC025627.2-201ENST00000576220 160 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 MIR4284-201ENST00000578924 81 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.37□□□□□ -1.87
SDCBPO00560 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.37□□□□□ -1.87
SDCBPO00560 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 RLIMP2-201ENST00000427891 1563 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC074029.4-201ENST00000624796 1859 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SDCBPO00560 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.36□□□□□ -1.87
SDCBPO00560 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SDCBPO00560 AC093311.1-201ENST00000506586 2021 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.36□□□□□ -1.87
SDCBPO00560 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SDCBPO00560 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SDCBPO00560 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 CHIAP3-201ENST00000423668 1133 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.36□□□□□ -1.87
SDCBPO00560 IFNNP1-201ENST00000429219 553 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 RPL7P4-203ENST00000430239 730 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.36□□□□□ -1.87
SDCBPO00560 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 RPS4XP4-201ENST00000443195 763 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.36□□□□□ -1.87
SDCBPO00560 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 AC092691.2-201ENST00000461787 803 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 RN7SL481P-201ENST00000477764 299 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 STRADBP1-201ENST00000478954 1281 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AC105137.1-201ENST00000484355 562 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AC091167.1-201ENST00000492017 396 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.36□□□□□ -1.87
SDCBPO00560 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.36□□□□□ -1.87
SDCBPO00560 MIR5684-201ENST00000585074 65 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 AL139286.1-201ENST00000604465 483 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SDCBPO00560 AC124312.6-202ENST00000623624 418 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.36□□□□□ -1.87
SDCBPO00560 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.36□□□□□ -1.87
SDCBPO00560 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.36□□□□□ -1.87
SDCBPO00560 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SDCBPO00560 USP9YP4-201ENST00000424401 1745 ntBASIC3.36□□□□□ -1.87
SDCBPO00560 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.35□□□□□ -1.87
SDCBPO00560 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SDCBPO00560 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SDCBPO00560 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.35□□□□□ -1.87
SDCBPO00560 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SDCBPO00560 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SDCBPO00560 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.35□□□□□ -1.87
SDCBPO00560 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SDCBPO00560 HMGN2P8-201ENST00000391458 268 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 AL603766.1-201ENST00000407763 664 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.35□□□□□ -1.87
SDCBPO00560 AL590609.2-201ENST00000421430 368 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 RPL18P10-201ENST00000425606 538 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.35□□□□□ -1.87
SDCBPO00560 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SDCBPO00560 RN7SL271P-201ENST00000487601 295 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.35□□□□□ -1.87
SDCBPO00560 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SDCBPO00560 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.35□□□□□ -1.87
SDCBPO00560 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SDCBPO00560 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SDCBPO00560 AC090312.1-201ENST00000580637 348 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 AC015911.5-201ENST00000587076 451 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 MIR8059-201ENST00000620427 81 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.35□□□□□ -1.87
SDCBPO00560 MIR7641-1-201ENST00000627518 61 ntBASIC3.35□□□□□ -1.87
SDCBPO00560 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
SDCBPO00560 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SDCBPO00560 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.35□□□□□ -1.87
SDCBPO00560 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms