Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR1303-201ENST00000408625 86 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AL158825.1-201ENST00000414735 521 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AC008072.1-201ENST00000434254 824 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 VN1R54P-201ENST00000435210 1049 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC28A1O00337 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 RPS3AP41-201ENST00000462701 778 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AF186190.1-201ENST00000517470 480 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 PHBP17-201ENST00000528576 541 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AP003049.1-201ENST00000529418 457 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC28A1O00337 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.28□□□□□ -1.72
SLC28A1O00337 PCNAP1-202ENST00000595299 752 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AP003117.1-201ENST00000602771 554 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 RPL21P136-201ENST00000605378 396 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AC131238.1-201ENST00000617135 328 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 MTCO1P18-201ENST00000455518 1419 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC28A1O00337 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SLC28A1O00337 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 RNA5SP397-201ENST00000391323 118 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 ATP5F1P2-201ENST00000398143 760 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 HMGB3P18-201ENST00000406327 590 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 PTGES3P2-201ENST00000407942 482 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
SLC28A1O00337 AP001324.1-201ENST00000428553 399 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC28A1O00337 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 RPS3AP53-201ENST00000454716 778 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC28A1O00337 RPS27AP17-201ENST00000463344 455 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC006967.1-201ENST00000467608 589 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC078857.1-201ENST00000469870 667 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC28A1O00337 TRBV8-2-201ENST00000475637 270 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 SNORD116-26-201ENST00000516006 96 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 AP001922.4-201ENST00000526967 290 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 OR5M2P-201ENST00000529003 936 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 BRD9P1-201ENST00000529855 560 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 AL136520.1-202ENST00000555494 763 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 MIR4512-201ENST00000583257 77 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.27□□□□□ -1.73
SLC28A1O00337 MIR7155-201ENST00000615925 56 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC090510.2-201ENST00000617465 629 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 AC018445.2-201ENST00000622987 260 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC28A1O00337 AC006065.6-201ENST00000625201 545 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 ATE1-AS1-202ENST00000636460 506 ntBASIC4.27□□□□□ -1.73
SLC28A1O00337 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SLC28A1O00337 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC28A1O00337 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC28A1O00337 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SLC28A1O00337 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC28A1O00337 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 MIR16-2-201ENST00000362117 81 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 RNU6-609P-201ENST00000365459 107 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 ATP5F1P6-201ENST00000402768 767 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 ATF1P1-201ENST00000406040 927 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 RNU4-27P-201ENST00000410889 139 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms