Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC005341.1-201ENST00000571086 708 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SL356P-201ENST00000582228 248 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC068790.2-201ENST00000602601 557 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL137072.1-201ENST00000603444 466 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC010738.1-201ENST00000604970 987 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL022394.1-201ENST00000606979 292 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC135507.1-201ENST00000607214 561 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC072039.2-201ENST00000608883 439 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL049539.1-201ENST00000611964 459 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC100827.5-201ENST00000615883 426 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AP005432.1-201ENST00000580891 3485 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SKP149-201ENST00000363008 344 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SKP103-201ENST00000363848 320 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 RNU2-65P-201ENST00000410162 185 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AL139128.1-201ENST00000413921 941 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 RPL7AP49-201ENST00000429522 581 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 FABP7P2-201ENST00000429946 379 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AL591438.1-201ENST00000433508 581 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 GTF3AP5-201ENST00000442645 697 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 COX6CP18-201ENST00000448769 222 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 CBX1P2-201ENST00000453841 458 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 MTCO3P11-201ENST00000455103 774 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC108161.1-201ENST00000461060 402 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 HMGN1P9-201ENST00000515212 298 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 Y_RNA.655-201ENST00000515919 96 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-678P-201ENST00000516832 109 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 OR5D15P-201ENST00000531671 942 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 MIR4646-201ENST00000580775 63 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AP000769.2-201ENST00000602344 396 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC108738.1-201ENST00000603703 237 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 MIR6820-201ENST00000611508 62 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC244107.2-201ENST00000611773 76 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC004223.4-201ENST00000612426 332 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC005332.6-201ENST00000613178 446 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 FP325313.1-201ENST00000638228 703 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 DDX43P2-201ENST00000604753 1354 ntBASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB1Q9Y5F3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC087359.1-201ENST00000508335 1740 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC011493.1-201ENST00000596753 1632 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms