Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR7159-201ENST00000620587 66 ntBASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AC011455.2-201ENST00000599320 3336 ntBASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ZC3H4Q9UPT8 MTCO1P9-201ENST00000505577 1534 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 U8.3-201ENST00000363321 132 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 Y_RNA.138-201ENST00000363462 102 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 RNU1-49P-201ENST00000363468 159 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 RPL7P4-203ENST00000430239 730 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AL365400.1-201ENST00000431854 640 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MTCYBP6-201ENST00000441810 138 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC112204.1-201ENST00000502591 103 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 SNORA48.10-201ENST00000516965 160 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AP003467.2-201ENST00000520175 319 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 OR8A2P-201ENST00000528631 952 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AP000790.1-201ENST00000528891 737 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC007424.1-203ENST00000554613 687 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MIR4776-2-201ENST00000580204 80 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MIR4307-201ENST00000582802 84 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AL161734.1-201ENST00000609720 557 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MIR1302-1-201ENST00000637932 143 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 BIN2P1-201ENST00000504996 1530 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 AC034229.2-201ENST00000566945 2508 ntBASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.55□□□□□ -1.2
ZC3H4Q9UPT8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 C4BPAP1-201ENST00000415474 1893 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 Y_RNA.431-201ENST00000384086 102 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 Y_RNA.481-201ENST00000384373 102 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 VN1R8P-201ENST00000407739 893 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 VN1R36P-201ENST00000414936 291 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 GTF2IP20-201ENST00000431663 360 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AC109583.1-201ENST00000432156 268 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 TXNP5-201ENST00000441043 315 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AC026427.2-201ENST00000506228 536 ntBASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.54□□□□□ -1.2
ZC3H4Q9UPT8 Y_RNA.672-201ENST00000516289 104 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms