Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 SETP9-201ENST00000423837 832 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 HMGN1P15-201ENST00000513870 295 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 SOD1P3-201ENST00000518682 454 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AL137849.1-201ENST00000604767 169 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AL034408.1-202ENST00000636088 415 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC024560.2-201ENST00000507981 1497 ntBASIC5.02□□□□□ -1.61
SCN11AQ9UI33 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SCN11AQ9UI33 AC007068.1-201ENST00000396690 844 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AP000907.1-201ENST00000428428 510 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AL121890.2-201ENST00000617644 465 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC023632.6-201ENST00000624338 2177 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 MIR634-201ENST00000385208 97 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 RN7SKP177-201ENST00000410567 355 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 MAPRE1P3-201ENST00000435438 796 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 RPL23AP12-201ENST00000467573 473 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC104619.4-201ENST00000510773 249 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC022695.1-201ENST00000522089 237 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AC068020.1-201ENST00000594215 661 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 LSM1P2-201ENST00000604911 322 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 AL159169.3-201ENST00000608871 561 ntBASIC5.01□□□□□ -1.61
SCN11AQ9UI33 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN11AQ9UI33 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SCN11AQ9UI33 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN11AQ9UI33 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5□□□□□ -1.61
SCN11AQ9UI33 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 MIR183-201ENST00000384958 110 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5□□□□□ -1.61
SCN11AQ9UI33 Z92545.1-201ENST00000411782 234 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AC245052.5-201ENST00000416320 649 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AL159987.2-201ENST00000432754 307 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AC007967.1-201ENST00000455422 1159 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 UBDP1-202ENST00000457888 382 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCN11AQ9UI33 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5□□□□□ -1.61
SCN11AQ9UI33 UBTFL9-201ENST00000534504 1148 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AC106782.4-201ENST00000568264 210 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5□□□□□ -1.61
SCN11AQ9UI33 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 AL591424.2-201ENST00000617023 128 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5□□□□□ -1.61
SCN11AQ9UI33 AL773545.4-201ENST00000637262 310 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 AL513478.4-201ENST00000641636 310 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5□□□□□ -1.61
SCN11AQ9UI33 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
SCN11AQ9UI33 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5□□□□□ -1.61
SCN11AQ9UI33 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SCN11AQ9UI33 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SCN11AQ9UI33 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SCN11AQ9UI33 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCN11AQ9UI33 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms