Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 RNA5SP399-201ENST00000364003 117 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 RNU6-628P-201ENST00000410675 107 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 TBCAP1-201ENST00000436520 327 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AC092691.2-201ENST00000461787 803 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AC023632.4-201ENST00000517783 191 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 MIR4444-1-201ENST00000581696 74 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 MIR4444-2-201ENST00000584390 74 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 SNX6P1-201ENST00000601728 1224 ntBASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPC1L1Q9UHC9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NPC1L1Q9UHC9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
NPC1L1Q9UHC9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 RNA5SP283-201ENST00000365604 119 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 MIR670-201ENST00000390142 98 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 ELOCP8-201ENST00000439309 332 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 ELOCP15-201ENST00000442090 332 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 FCF1P7-201ENST00000451185 558 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 RPL31P61-201ENST00000496160 376 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AC025627.2-201ENST00000576220 160 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AL356863.1-201ENST00000623378 1080 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AC112484.5-201ENST00000624189 228 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 AC005332.5-201ENST00000591222 2919 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 MTCO1P22-201ENST00000604619 1360 ntBASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.46□□□□□ -1.54
NPC1L1Q9UHC9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 CUL4AP1-201ENST00000514750 1863 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 OR5BE1P-201ENST00000425977 939 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC025857.1-201ENST00000525252 377 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 RN7SL703P-201ENST00000578485 302 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC009237.17-201ENST00000618111 748 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC112200.1-201ENST00000625015 234 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 OR5BE1P-202ENST00000641168 1176 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 MTND5P23-201ENST00000430812 1655 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 HSPD1P11-201ENST00000508643 1702 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 MAPK10-253ENST00000641010 4072 ntBASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPC1L1Q9UHC9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 RN7SKP202-201ENST00000410439 330 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms