Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC114546.3-201ENST00000623582 1734 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC012020.1-201ENST00000624541 1728 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 SPRR2C-201ENST00000290702 219 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 MIR195-201ENST00000385194 87 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RN7SKP199-201ENST00000410325 305 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 COX6CP15-201ENST00000426313 211 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AL590623.1-201ENST00000427864 105 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CDY14P-201ENST00000431260 1014 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 BTF3P10-201ENST00000433415 495 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CDY12P-201ENST00000440679 1015 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 HSFY6P-201ENST00000445573 403 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CDY13P-201ENST00000445813 1015 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CDY23P-201ENST00000451661 1014 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 FGF7P3-201ENST00000454645 303 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CYCSP28-201ENST00000534284 321 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC012414.2-201ENST00000559474 187 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RPL7P50-201ENST00000600588 727 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AL160290.3-201ENST00000604869 165 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC010201.1-201ENST00000605051 540 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 Z98200.1-201ENST00000607298 470 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 SNORD91B-202ENST00000608459 222 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AL162574.2-201ENST00000614618 657 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC140113.4-201ENST00000622087 222 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AC067852.7-201ENST00000623270 535 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 EOGT-210ENST00000615922 1931 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 USP9YP4-201ENST00000424401 1745 ntBASIC4.24□□□□□ -1.73
APOBEC3BQ9UH17 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 OR10AB1P-202ENST00000641219 1686 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 Z73965.1-201ENST00000623412 2297 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RNU1-14P-201ENST00000362759 152 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RPS27AP11-201ENST00000402798 447 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AL078604.1-201ENST00000404609 466 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RNU6-628P-201ENST00000410675 107 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 SNORA74C-2-201ENST00000411179 201 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 USP9YP19-201ENST00000412165 485 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC019070.1-201ENST00000415008 1024 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 EIF1P3-201ENST00000423841 334 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AL157831.1-201ENST00000426134 473 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RWDD4P2-201ENST00000426392 563 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 CEACAMP1-201ENST00000434624 1035 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RWDD4P1-201ENST00000488019 565 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 RPS27AP13-201ENST00000498403 237 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 KCTD9P2-201ENST00000512203 1013 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 ACTR6P1-201ENST00000514311 1104 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC018552.3-201ENST00000567416 561 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AGGF1P6-201ENST00000569213 976 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AL161729.3-201ENST00000603533 673 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms