Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC016839.1-201ENST00000578162 867 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 SNORA74C-1-201ENST00000580726 201 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC008751.2-201ENST00000597885 980 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 LSM1P2-201ENST00000604911 322 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AL353726.1-201ENST00000614041 1000 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC139769.3-201ENST00000618383 175 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC092608.3-201ENST00000625017 386 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 SOCS5P3-201ENST00000425115 1576 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL20A1Q9P218 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC005261.4-201ENST00000600047 1385 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 RNU6-413P-201ENST00000384115 107 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AL079342.2-201ENST00000403367 482 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 OR4K6P-201ENST00000416478 897 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 ATG4AP1-201ENST00000416893 538 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC013429.2-201ENST00000418798 781 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AL031663.1-201ENST00000437445 219 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC016831.4-201ENST00000438302 307 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 PTENP1-201ENST00000447117 1215 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 OR52A4P-201ENST00000472867 958 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC073073.1-201ENST00000493920 463 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL20A1Q9P218 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC119751.5-201ENST00000514077 770 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 RPL23AP53-201ENST00000521854 457 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 OR8A2P-201ENST00000528631 952 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC023813.2-201ENST00000564321 469 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC145350.1-201ENST00000567426 208 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC092954.1-201ENST00000609121 445 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC006840.1-201ENST00000623069 542 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AP002967.1-201ENST00000624203 539 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC015726.3-201ENST00000624501 418 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 AC000367.1-201ENST00000452711 1766 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL20A1Q9P218 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
COL20A1Q9P218 OR9K1P-202ENST00000641111 3217 ntBASIC5.44□□□□□ -1.54
COL20A1Q9P218 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL20A1Q9P218 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 DHX40P1-201ENST00000588725 1412 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 RPS4XP9-201ENST00000405151 780 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC048351.1-201ENST00000420064 602 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 GAPDHP49-201ENST00000421421 961 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 CNOT7P1-201ENST00000429006 852 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 RPS6P15-201ENST00000431996 751 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 CBX1P4-201ENST00000439415 457 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC007327.1-201ENST00000447461 264 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC079168.2-201ENST00000453977 416 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AL035404.1-201ENST00000497982 568 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms