Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RNU6-621P-201ENST00000364752 109 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RNU4-12P-201ENST00000365233 139 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC007066.1-201ENST00000392902 381 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RPL34P3-201ENST00000421454 338 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 MTND1P14-201ENST00000427400 950 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 BX323845.3-201ENST00000428215 527 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC079807.1-201ENST00000429993 481 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 MTCO1P54-201ENST00000430139 712 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 B3GNT2P1-201ENST00000434960 952 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC093716.1-201ENST00000435923 377 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL512286.1-201ENST00000439244 400 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RPL12P11-201ENST00000439970 501 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 NFU1P2-201ENST00000448700 469 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RPL9P6-201ENST00000492764 598 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL358832.1-201ENST00000497800 389 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 DYNLL1P6-201ENST00000503440 264 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC108120.2-201ENST00000512973 294 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC008126.1-201ENST00000549019 480 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ZNF519P2-201ENST00000557032 169 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 C8orf59P2-201ENST00000603441 271 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AC063943.3-201ENST00000615562 356 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RN7SL544P-201ENST00000617232 284 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RN7SL763P-201ENST00000620922 284 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 OR52B5P-202ENST00000641118 1110 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 AL354685.2-201ENST00000448218 1447 ntBASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PARPBPQ9NWS1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 AC103591.2-201ENST00000265259 766 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 OR9G4-201ENST00000302957 984 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 Y_RNA.61-201ENST00000362835 102 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 RNA5SP500-201ENST00000364486 119 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 RN7SKP78-201ENST00000364711 318 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 Y_RNA.302-201ENST00000364997 102 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 OR2AT2P-201ENST00000413438 905 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 SDHDP6-201ENST00000414693 480 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 RPL23AP39-201ENST00000415533 405 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 BTF3P10-201ENST00000433415 495 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 SEPT7P5-201ENST00000434048 306 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 KRT8P51-201ENST00000438938 274 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 FDX1P2-201ENST00000450769 375 ntBASIC5.11□□□□□ -1.59
PARPBPQ9NWS1 FRG2FP-204ENST00000453982 852 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms