Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 RNA5SP326-201ENST00000363209 110 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SNORA74A-201ENST00000364089 198 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 MIR105-2-201ENST00000385083 81 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 EI24P3-201ENST00000399046 1062 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 FABP12P1-201ENST00000401911 322 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC002524.1-201ENST00000411687 547 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 MTCYBP38-201ENST00000417160 1123 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 LINC00993-201ENST00000420453 540 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL589823.1-201ENST00000429577 183 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 KCTD10P1-201ENST00000434203 625 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL137845.2-201ENST00000444292 988 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 OR7E116P-201ENST00000448529 957 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 GAPDHP14-201ENST00000450472 937 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 RN7SL610P-201ENST00000463845 291 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 RN7SL515P-201ENST00000463999 297 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC013828.1-201ENST00000481845 158 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC108078.3-201ENST00000502633 489 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC010424.1-201ENST00000506336 297 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 KRT19P6-201ENST00000510983 209 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 CR383658.1-201ENST00000514609 734 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 IGKV2-18-201ENST00000522607 343 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 OR5M2P-201ENST00000529003 936 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC122688.1-201ENST00000541494 223 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC074051.3-201ENST00000570238 358 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC108673.3-201ENST00000609183 335 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL133243.1-201ENST00000614487 366 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC090116.1-201ENST00000615679 446 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC138965.3-201ENST00000623875 498 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC079097.1-201ENST00000512187 1399 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 XPOTP1-201ENST00000443317 2398 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC011755.1-201ENST00000623763 2049 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 Y_RNA.302-201ENST00000364997 102 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 MIR143-201ENST00000385300 106 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AL132875.1-201ENST00000403623 949 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 TPMTP3-201ENST00000411928 735 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC113412.1-201ENST00000425840 504 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 NIPA2P1-201ENST00000426223 976 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AL031736.2-201ENST00000426573 787 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 UBE2FP3-201ENST00000436366 524 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 RPL26P28-201ENST00000451325 435 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AL024509.2-201ENST00000493462 493 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 RNA5SP362-201ENST00000516048 118 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AC239860.2-201ENST00000525886 270 ntBASIC5.36□□□□□ -1.55
CCM2LQ9NUG4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms