Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AP001284.1-201ENST00000528393 2118 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 MIR551A-201ENST00000385042 96 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 MTCO1P21-201ENST00000416634 589 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 NPM1P11-201ENST00000417106 855 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC113412.1-201ENST00000425840 504 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL590103.1-201ENST00000434488 307 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC002504.1-201ENST00000438281 691 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 UBE2V1P5-201ENST00000440070 405 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC092809.1-201ENST00000441469 474 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC104306.1-201ENST00000449702 371 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 VDAC2P4-201ENST00000452925 711 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL645937.3-201ENST00000453647 936 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC104689.1-201ENST00000473356 768 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC098799.3-201ENST00000506095 438 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 HMGB3P13-201ENST00000511263 607 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 BX510359.5-201ENST00000515651 304 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 RNU6-1225P-201ENST00000516336 65 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 HIGD1AP10-201ENST00000527837 282 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 BLZF2P-201ENST00000553776 1130 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC127381.1-201ENST00000555979 939 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC012435.1-202ENST00000568772 240 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL390838.2-201ENST00000602394 274 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC004987.4-201ENST00000603383 338 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC006363.1-201ENST00000603806 463 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC004492.1-201ENST00000607036 742 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC006338.2-201ENST00000616864 791 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC008443.7-201ENST00000622195 246 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC092656.1-203ENST00000624134 423 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL049536.1-201ENST00000625043 744 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC099654.6-201ENST00000636487 512 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC073869.10-201ENST00000642016 354 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC092104.1-201ENST00000497346 1441 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 CASC19-284ENST00000642142 1868 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AP005432.1-201ENST00000580891 3485 ntBASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
AMBRA1Q9C0C7 AC104623.2-202ENST00000623477 4002 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 AC109315.1-201ENST00000584143 1347 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 AC000374.1-201ENST00000434698 1745 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 Y_RNA.311-201ENST00000365068 96 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 OR52E6-202ENST00000379946 954 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 Y_RNA.559-201ENST00000384686 107 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 AL590290.1-201ENST00000405336 380 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 NPM1P40-201ENST00000412758 733 ntBASIC5.01□□□□□ -1.61
AMBRA1Q9C0C7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 328.4 ms