Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RNU6-1151P-201ENST00000384684 107 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC009804.1-201ENST00000400949 179 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL133264.1-201ENST00000407157 562 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RNU2-42P-201ENST00000410697 113 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL513325.1-201ENST00000417716 1034 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC004074.1-201ENST00000421810 1063 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 CYCSP6-201ENST00000434498 302 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC004865.1-201ENST00000442276 1003 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC002553.2-201ENST00000453217 340 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC023141.9-201ENST00000458734 412 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RN7SL189P-201ENST00000468631 289 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 BZW1P2-201ENST00000473537 826 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RPL7P51-201ENST00000490532 749 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC011352.3-201ENST00000505162 593 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 OR5BM1P-201ENST00000512021 366 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RNU6-885P-201ENST00000516607 104 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RNU6-232P-201ENST00000517144 64 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 UBE2NP1-201ENST00000545592 458 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC116553.2-201ENST00000564203 463 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC090616.2-202ENST00000584248 222 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL162431.4-201ENST00000604674 411 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL592221.1-201ENST00000605266 382 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL354976.1-201ENST00000613843 387 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC010329.2-201ENST00000595195 2737 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 OR56B2P-201ENST00000317102 954 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RNU6-582P-201ENST00000362989 107 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RNU5D-1-201ENST00000363299 116 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 Y_RNA.311-201ENST00000365068 96 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RNA5SP223-201ENST00000365174 120 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RNU1-77P-201ENST00000390868 162 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL139098.1-201ENST00000407291 389 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 NPM1P40-201ENST00000412758 733 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 BX119904.4-201ENST00000424402 301 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 NPM1P24-201ENST00000428039 894 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL050321.1-201ENST00000432363 400 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC012512.1-201ENST00000446594 718 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 SETP20-201ENST00000457046 852 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RPL7AP10-201ENST00000481016 791 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 RN7SL547P-201ENST00000490793 290 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 SETP14-201ENST00000497538 873 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC104109.1-201ENST00000498563 436 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC100784.1-201ENST00000522790 310 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AF279873.1-201ENST00000523393 313 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 LSM3P2-201ENST00000551246 273 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 MIR4999-201ENST00000585029 91 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC110760.3-201ENST00000598794 467 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC133552.5-201ENST00000604266 540 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL163642.2-201ENST00000604722 1019 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AL139418.1-201ENST00000613613 177 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms