Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 RNU6-374P-201ENST00000364146 108 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 RNU6-660P-201ENST00000364566 109 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 RN7SKP292-201ENST00000365522 317 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LITAFQ99732 Y_RNA.517-201ENST00000384551 106 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 MIR589-201ENST00000385238 99 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AL589647.1-201ENST00000402485 466 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 MRPL32P1-201ENST00000406301 247 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 RN7SKP117-201ENST00000410175 264 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 USP9YP33-201ENST00000412220 421 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AL354890.1-201ENST00000413730 346 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 CDK8P2-201ENST00000415020 547 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 FCF1P2-201ENST00000415284 583 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC234782.4-201ENST00000417646 1048 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 AC092646.1-201ENST00000427142 901 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 USP9YP35-201ENST00000435696 412 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 TMX2P1-201ENST00000436507 708 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC092641.1-201ENST00000440229 772 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC004865.1-201ENST00000442276 1003 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 CDC27P1-201ENST00000445384 715 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 PCMTD1P3-201ENST00000451824 472 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 RPL5P32-201ENST00000454085 879 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 SNRPGP9-201ENST00000456025 225 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC112206.1-201ENST00000468416 477 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 RN7SL57P-201ENST00000493687 290 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC006499.5-201ENST00000505037 514 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC090071.1-201ENST00000507713 644 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC109458.1-201ENST00000508858 316 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LITAFQ99732 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 SCARNA6.1-201ENST00000516989 238 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 AF279873.1-201ENST00000523393 313 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC093519.1-201ENST00000566109 298 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 LINC00556-201ENST00000569603 412 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 MIR4675-201ENST00000577898 77 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 MIR4776-2-201ENST00000580204 80 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC107982.3-201ENST00000584957 985 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC020914.6-201ENST00000594327 272 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 RNF138P2-201ENST00000603490 592 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC091488.1-201ENST00000604239 660 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC011626.1-201ENST00000604710 562 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AL390877.1-201ENST00000605704 214 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 MIR8082-201ENST00000612488 81 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC025594.3-201ENST00000613068 790 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AL121873.1-201ENST00000616013 524 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC018755.4-201ENST00000619715 454 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC092650.2-201ENST00000619984 902 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 KDM5DP1-201ENST00000622542 298 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AL356266.1-201ENST00000623311 483 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC006927.3-201ENST00000638789 384 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LITAFQ99732 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.56□□□□□ -1.84
LITAFQ99732 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LITAFQ99732 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.56□□□□□ -1.84
LITAFQ99732 AC022031.1-201ENST00000585985 2593 ntBASIC3.56□□□□□ -1.84
LITAFQ99732 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 QRSL1P1-201ENST00000400977 1540 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC3.55□□□□□ -1.84
LITAFQ99732 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 CASC19-204ENST00000641001 2055 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms