Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 PHBP16-201ENST00000446318 950 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 FTH1P2-201ENST00000466086 412 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 RPS27AP16-201ENST00000492222 470 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 RNU6-319P-201ENST00000516025 108 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 MIR3939-201ENST00000582614 106 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 MIR3138-201ENST00000585238 82 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AC007620.3-201ENST00000608131 497 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL451142.2-201ENST00000429076 2090 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC009951.1-201ENST00000623674 2614 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC090017.1-201ENST00000548612 1779 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 OR5P1P-201ENST00000299512 925 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC011933.1-201ENST00000413334 321 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 RPL7P32-201ENST00000457119 744 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC116533.1-201ENST00000459748 321 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 LARP7P4-201ENST00000481075 878 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 BNIP3P41-201ENST00000503774 571 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC068446.3-201ENST00000555285 382 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC019131.2-201ENST00000609071 870 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AP000756.2-201ENST00000624168 2567 ntBASIC4.3□□□□□ -1.72
C9orf72Q96LT7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf72Q96LT7 AC015813.6-201ENST00000624409 5808 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 HMGB3P22-202ENST00000451823 572 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AL121877.1-201ENST00000453704 622 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AP000926.3-201ENST00000497201 299 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 PSMB7P1-201ENST00000556349 514 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 SS18L2P2-201ENST00000583960 235 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AC020910.2-201ENST00000603635 610 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 MIR7702-201ENST00000621931 59 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms