Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.55□□□□□ -1.52
USP47Q96K76 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 GNRHR2P1-201ENST00000555315 631 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP47Q96K76 CR392039.5-201ENST00000623201 510 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP47Q96K76 AC012442.3-202ENST00000636742 206 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP47Q96K76 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP47Q96K76 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP47Q96K76 Y_RNA.333-201ENST00000365274 102 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 RNU6-213P-201ENST00000384051 104 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 MIR449B-201ENST00000384995 97 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 MIR1251-201ENST00000408552 70 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 GOT2P5-201ENST00000433995 546 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 RPL23AP83-201ENST00000434984 473 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 VN1R25P-201ENST00000443385 738 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 VN1R40P-201ENST00000455196 941 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 EIF2S2P5-201ENST00000457635 968 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 AC087499.8-201ENST00000578406 226 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 AC244100.1-202ENST00000621554 382 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.55□□□□□ -1.52
USP47Q96K76 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 FAM91A3P-201ENST00000456826 2544 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
USP47Q96K76 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
USP47Q96K76 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
USP47Q96K76 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 NPM1P38-201ENST00000403835 865 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.54□□□□□ -1.52
USP47Q96K76 CRYBB2P1-203ENST00000415709 538 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 AC069157.1-201ENST00000421749 137 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 TPTE2P3-201ENST00000441562 1189 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.54□□□□□ -1.52
USP47Q96K76 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.54□□□□□ -1.52
USP47Q96K76 HSPE1P5-201ENST00000561489 272 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.54□□□□□ -1.52
USP47Q96K76 OOSP1P2-201ENST00000579644 351 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.54□□□□□ -1.52
USP47Q96K76 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.54□□□□□ -1.52
USP47Q96K76 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.54□□□□□ -1.52
USP47Q96K76 AL356121.2-201ENST00000624715 780 ntBASIC5.54□□□□□ -1.52
USP47Q96K76 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
USP47Q96K76 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP47Q96K76 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.53□□□□□ -1.52
USP47Q96K76 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
USP47Q96K76 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
USP47Q96K76 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
USP47Q96K76 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.53□□□□□ -1.52
USP47Q96K76 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 SNORA63.1-201ENST00000362493 131 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 TCEA1P4-201ENST00000415066 844 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 Z97055.1-201ENST00000419730 712 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.53□□□□□ -1.52
USP47Q96K76 AL035246.1-201ENST00000433554 1255 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 ELOCP18-201ENST00000434209 337 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 Z74696.2-201ENST00000436514 498 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 HMGB1P37-201ENST00000439613 609 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 RPL6P5-201ENST00000445678 828 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 IGKV2-23-201ENST00000518729 323 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 AC109635.6-201ENST00000525487 1113 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 MIR5685-201ENST00000579080 79 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 AP000255.1-201ENST00000610276 676 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 AC015722.2-201ENST00000622210 551 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 AC079298.2-201ENST00000623885 459 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 AC132825.8-201ENST00000640783 297 ntBASIC5.53□□□□□ -1.52
USP47Q96K76 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP47Q96K76 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.53□□□□□ -1.52
USP47Q96K76 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms