Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 LINC01109-201ENST00000603837 3081 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 RN7SKP177-201ENST00000410567 355 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC068533.1-201ENST00000418542 415 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AL162151.2-201ENST00000448875 158 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AP003730.1-201ENST00000524605 285 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 TVP23BP1-201ENST00000557500 617 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 RPL21P12-201ENST00000559810 515 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 YWHAEP5-201ENST00000431545 765 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 PPIAP15-201ENST00000479662 484 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AL451044.1-201ENST00000604867 238 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 AP000255.1-201ENST00000610276 676 ntBASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM3Q8TF72 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 MIR218-2-201ENST00000385006 110 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 SETP15-201ENST00000412724 337 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 HMGN2P31-201ENST00000432430 273 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AL500522.2-201ENST00000448562 343 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC025445.1-201ENST00000502728 300 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 FTH1P21-201ENST00000512179 511 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC119751.5-201ENST00000514077 770 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 PAICSP4-201ENST00000517543 1253 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC011270.1-201ENST00000558606 583 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 QTRT1P1-201ENST00000604344 1078 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 RNU4-89P-201ENST00000607443 133 ntBASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.15□□□□□ -1.74
SHROOM3Q8TF72 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 AC068254.2-201ENST00000623938 3577 ntBASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.15□□□□□ -1.75
SHROOM3Q8TF72 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 TPT1P2-201ENST00000413105 503 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC020978.9-201ENST00000624380 1141 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 MIR3651-201ENST00000630427 90 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC027228.2-201ENST00000567141 2154 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 RNA5SP124-201ENST00000362739 110 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 RNA5SP97-201ENST00000365006 84 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms