Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RN7SL604P-201ENST00000492589 296 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 BNIP3P41-201ENST00000503774 571 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 DUX4L52-201ENST00000549363 777 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC067838.1-201ENST00000606064 577 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 MIR6867-201ENST00000610636 67 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC015908.5-201ENST00000623289 343 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AC112484.5-201ENST00000624189 228 ntBASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FNDC9Q8TBE3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.71□□□□□ -1.81
FNDC9Q8TBE3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
FNDC9Q8TBE3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 OR8G2P-201ENST00000412796 908 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 JKAMPP1-201ENST00000413804 919 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC009302.1-201ENST00000417147 390 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AL356095.1-201ENST00000417217 199 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 IPMKP1-201ENST00000425988 855 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 YY1P1-201ENST00000427625 668 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 BX119904.1-201ENST00000432026 348 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC104306.1-201ENST00000449702 371 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 HSPE1P22-201ENST00000456856 327 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC079804.1-201ENST00000461922 436 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 RPS6P4-201ENST00000494693 758 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 HPRT1P2-201ENST00000505250 544 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC090948.2-201ENST00000607363 564 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 RNU4-89P-201ENST00000607443 133 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AL159169.2-201ENST00000610061 1269 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 AC116667.1-201ENST00000604855 2072 ntBASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.71□□□□□ -1.82
FNDC9Q8TBE3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC092162.3-201ENST00000624511 1624 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 OR11H4-201ENST00000315409 1082 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 RNA5SP388-201ENST00000362584 119 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 GCNT6-201ENST00000379591 934 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 HSPD1P16-201ENST00000402302 394 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 ELOCP8-201ENST00000439309 332 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 ELOCP15-201ENST00000442090 332 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC006326.1-201ENST00000445465 787 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 FTH1P2-201ENST00000466086 412 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 TRBV8-1-201ENST00000481590 279 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC139783.2-201ENST00000504847 1145 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 QTRT1P1-201ENST00000604344 1078 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC016252.1-201ENST00000609721 474 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 AC067931.1-201ENST00000624190 671 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 RNA5SP196-201ENST00000625967 102 ntBASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
FNDC9Q8TBE3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms