Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL929601.4-201ENST00000613011 1341 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 OR52E6-202ENST00000379946 954 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 UBE2V1P3-201ENST00000439651 417 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CYCSP53-201ENST00000455540 265 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RNA5SP103-201ENST00000459503 118 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RPL7P15-201ENST00000461190 712 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC108751.2-201ENST00000469993 231 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC105137.1-201ENST00000484355 562 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC105233.3-201ENST00000531125 744 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP001804.2-201ENST00000533932 910 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC079171.1-201ENST00000568788 914 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC005086.4-201ENST00000623065 213 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL513548.1-201ENST00000562904 1724 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL022722.2-201ENST00000402519 180 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 TBCAP1-201ENST00000436520 327 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ABCF2P2-201ENST00000450549 296 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RPS20P4-201ENST00000461659 355 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 IMMP1LP1-201ENST00000605170 488 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MIR6868-201ENST00000611215 58 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC007342.8-201ENST00000623278 678 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP001002.2-201ENST00000625137 386 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP001002.1-201ENST00000625148 1513 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MIR218-2-201ENST00000385006 110 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC079804.1-201ENST00000461922 436 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 UBE2DNL-203ENST00000474922 222 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MTND1P6-201ENST00000523621 946 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC027176.2-201ENST00000559166 746 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL359922.3-201ENST00000624779 1670 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC007529.1-201ENST00000418574 2178 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 NXPH1-205ENST00000602349 1953 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 OR11H4-201ENST00000315409 1082 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL583835.1-201ENST00000399570 407 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC116312.1-201ENST00000606841 314 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC008013.2-202ENST00000637965 364 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 OR51H2P-202ENST00000641424 3046 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC017079.2-201ENST00000416102 485 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RPL7P22-201ENST00000466005 733 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 Y_RNA.673-201ENST00000516306 88 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP000619.3-201ENST00000535634 1127 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL513477.2-201ENST00000607858 568 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC006453.5-201ENST00000636451 619 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ZNF285B-201ENST00000561698 1767 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 SUPT16HP1-201ENST00000537175 3133 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 RNU11-4P-201ENST00000391149 133 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 EI24P3-201ENST00000399046 1062 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 TPT1P2-201ENST00000413105 503 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms