Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 RPS3AP6-201ENST00000484430 795 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AC010680.3-201ENST00000604215 520 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 CR392039.4-201ENST00000624968 501 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 ZNF602P-201ENST00000405929 924 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PTP4A1P3-201ENST00000433661 420 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 CEACAMP1-201ENST00000434624 1035 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 RN7SL504P-201ENST00000494496 287 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 RPL29P14-201ENST00000495837 428 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MRPS21P9-201ENST00000571150 257 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PRELID3BP3-201ENST00000584963 545 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 LINC01109-201ENST00000603837 3081 ntBASIC3.36□□□□□ -1.87
CCDC168Q8NDH2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 RPL21P23-201ENST00000446654 460 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 RHEBP2-201ENST00000450289 600 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 UBDP1-202ENST00000457888 382 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC104619.4-201ENST00000510773 249 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC006349.1-201ENST00000555526 235 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC006960.3-201ENST00000561845 705 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC022655.2-201ENST00000577280 318 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC012417.1-201ENST00000582307 1039 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 SNX18P3-202ENST00000565670 1750 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 EOGT-210ENST00000615922 1931 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 IL6STP1-201ENST00000346911 1020 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 RPL23AP37-201ENST00000479658 549 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 FAM172BP-201ENST00000487497 1089 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC010201.1-201ENST00000605051 540 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC138907.10-201ENST00000623708 983 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AC074029.4-201ENST00000624796 1859 ntBASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC168Q8NDH2 AP001284.1-201ENST00000528393 2118 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 HMGB3P19-201ENST00000403971 560 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 AL161631.1-201ENST00000417933 486 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 USP9YP36-201ENST00000424581 829 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 USP9YP31-201ENST00000431405 881 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 AC069306.1-201ENST00000507006 843 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 RNA5SP497-201ENST00000516081 97 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 Y_RNA.676-201ENST00000516393 96 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 AC073136.1-201ENST00000449426 2884 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC168Q8NDH2 SCN1A-220ENST00000641603 12506 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP151-201ENST00000365632 117 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms