Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 SEPT2P1-201ENST00000419651 180 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AL451139.1-201ENST00000434718 346 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 MTND1P1-201ENST00000445453 368 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 MTND2P19-201ENST00000449129 1012 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 PTGES3P5-201ENST00000455109 434 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 RPS17P11-201ENST00000474297 293 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 RPL36AP41-201ENST00000493820 306 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC091951.3-201ENST00000504093 246 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC138409.2-202ENST00000507274 458 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC134698.4-201ENST00000523451 826 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 MTND4P33-201ENST00000556706 766 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC106785.1-201ENST00000565935 262 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC008782.1-201ENST00000603386 430 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC073387.2-201ENST00000604797 784 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC005021.1-201ENST00000608730 355 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AL360219.1-201ENST00000610230 366 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC024941.1-201ENST00000612250 334 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 ZNF876P-202ENST00000398732 1485 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 AC090220.1-201ENST00000593078 1699 ntBASIC5.88□□□□□ -1.47
SYNE4Q8N205 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SYNE4Q8N205 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.88□□□□□ -1.47
SYNE4Q8N205 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORD116-9-201ENST00000384000 95 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORD116-3-201ENST00000384287 95 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORD116-7-201ENST00000384404 95 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORD116-5-201ENST00000384462 95 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORD65-201ENST00000391079 73 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AL590762.2-201ENST00000395798 571 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 GSTA12P-201ENST00000402398 508 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 RPL21P67-201ENST00000402896 478 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 SFR1P1-201ENST00000403720 688 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 RNU6-648P-201ENST00000410190 107 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 RPL7AP25-201ENST00000423357 805 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 RGS17P1-201ENST00000423358 553 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 RPS27AP12-201ENST00000429552 465 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AL353706.1-201ENST00000436728 494 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 SNORA84-201ENST00000459229 133 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 PRELID3BP7-201ENST00000503606 469 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 MYL12BP2-201ENST00000503948 512 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC007016.1-201ENST00000512110 244 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC105233.3-201ENST00000531125 744 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AP000619.2-201ENST00000546014 969 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC034105.4-201ENST00000568304 277 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 NBR2-204ENST00000587322 63 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 VN1R85P-201ENST00000601587 426 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC005034.4-201ENST00000603612 899 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms