Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 MTCO1P27-201ENST00000448269 226 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 HIGD1AP8-201ENST00000453927 274 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC087879.1-201ENST00000474343 374 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RN7SL57P-201ENST00000493687 290 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RFPL4AP5-201ENST00000514977 504 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RNA5SP362-201ENST00000516048 118 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RN7SKP244-201ENST00000516513 307 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 HSPA8P13-201ENST00000523715 472 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 BGLT3-201ENST00000564523 994 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 RNU4ATAC-201ENST00000580972 127 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 FAM27E4-201ENST00000605259 342 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC128687.2-201ENST00000609657 566 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC091834.1-201ENST00000614543 472 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.36
NPAS4Q8IUM7 AC016583.1-201ENST00000624221 2431 ntBASIC6.52□□□□□ -1.36
NPAS4Q8IUM7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 MTND5P26-201ENST00000426018 1752 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 PANDAR-201ENST00000629595 1506 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 SELENOWP1-201ENST00000322792 252 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 RNU6-114P-201ENST00000384704 105 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AL391361.1-201ENST00000405580 489 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 SNRPEP6-201ENST00000407465 277 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 HMGB3P23-201ENST00000414981 585 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AMD1P1-201ENST00000457220 922 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 RN7SL809P-201ENST00000482040 297 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC022878.1-201ENST00000530684 149 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC051619.2-201ENST00000559063 397 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 MIR4504-201ENST00000577413 92 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 TPMTP1-201ENST00000592307 737 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC112191.3-201ENST00000604371 277 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC090578.1-201ENST00000604955 591 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AL158211.4-201ENST00000606988 584 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AL021918.2-201ENST00000613415 194 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 AC097063.1-201ENST00000426714 1797 ntBASIC6.52□□□□□ -1.37
NPAS4Q8IUM7 PHKBP1-201ENST00000450951 1951 ntBASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 RNA5SP500-201ENST00000364486 119 ntBASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 RNU6-533P-201ENST00000384144 107 ntBASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 AC126120.1-201ENST00000431082 470 ntBASIC6.51□□□□□ -1.37
NPAS4Q8IUM7 LSM1P1-201ENST00000438629 273 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms