Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RN7SKP6-201ENST00000364795 319 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 Y_RNA.408-201ENST00000383987 102 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 DBIP1-201ENST00000401435 260 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 RNU6-603P-201ENST00000411403 107 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC104333.2-201ENST00000422630 192 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AL133173.1-201ENST00000423458 397 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC010153.1-201ENST00000432862 727 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC098826.1-201ENST00000433943 471 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 YWHAQP9-201ENST00000445891 512 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 RPL21P6-201ENST00000479171 504 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AP006245.2-201ENST00000522004 300 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC024909.2-201ENST00000553035 286 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 IGBP1P1-201ENST00000554337 1009 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC090751.1-201ENST00000566966 267 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MIR4271-201ENST00000582451 67 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC133552.5-201ENST00000604266 540 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AP003973.1-201ENST00000604639 691 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC097505.1-201ENST00000610199 565 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC069209.1-201ENST00000619282 651 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AP003072.4-201ENST00000624580 310 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MIR193BHG-214ENST00000641765 509 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MAPK10-304ENST00000641341 3984 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC093591.2-201ENST00000565254 3843 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC104260.2-201ENST00000623551 3497 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AC000374.1-201ENST00000434698 1745 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AC046144.1-201ENST00000478559 1853 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AL391994.1-201ENST00000254724 282 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 Y_RNA.77-201ENST00000362962 107 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 RNU6-623P-201ENST00000363143 105 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 RNU6-619P-201ENST00000365146 108 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 SNORA16A-201ENST00000384342 137 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 Y_RNA.560-201ENST00000384689 102 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 RPS3AP26-201ENST00000398259 784 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AL138880.1-201ENST00000405824 642 ntBASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD4Q6ZW05 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms