Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CBX1P83916 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 BRAFP1-201ENST00000445336 2703 ntBASIC4.38□□□□□ -1.71
CBX1P83916 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CBX1P83916 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 MIR184-201ENST00000384962 84 ntBASIC4.38□□□□□ -1.71
CBX1P83916 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CBX1P83916 RPS27AP11-201ENST00000402798 447 ntBASIC4.38□□□□□ -1.71
CBX1P83916 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 AC096638.2-201ENST00000434965 711 ntBASIC4.38□□□□□ -1.71
CBX1P83916 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 H2AFZP5-201ENST00000446960 382 ntBASIC4.38□□□□□ -1.71
CBX1P83916 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 NDUFA5P8-201ENST00000449019 346 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC234781.3-201ENST00000452540 973 ntBASIC4.38□□□□□ -1.71
CBX1P83916 RPL7P22-201ENST00000466005 733 ntBASIC4.38□□□□□ -1.71
CBX1P83916 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
CBX1P83916 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 RN7SL222P-201ENST00000476452 299 ntBASIC4.38□□□□□ -1.71
CBX1P83916 RPS18P6-201ENST00000476880 458 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
CBX1P83916 RNU6-760P-201ENST00000516078 97 ntBASIC4.38□□□□□ -1.71
CBX1P83916 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
CBX1P83916 RNU6-1004P-201ENST00000516584 111 ntBASIC4.38□□□□□ -1.71
CBX1P83916 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.38□□□□□ -1.71
CBX1P83916 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.38□□□□□ -1.71
CBX1P83916 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 AC110743.1-201ENST00000584870 478 ntBASIC4.38□□□□□ -1.71
CBX1P83916 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 AL592295.2-201ENST00000612578 206 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC009032.1-201ENST00000617574 431 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC008115.4-201ENST00000619780 775 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 AP002505.2-201ENST00000623585 696 ntBASIC4.38□□□□□ -1.71
CBX1P83916 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX1P83916 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX1P83916 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX1P83916 AC099654.2-201ENST00000433031 1980 ntBASIC4.38□□□□□ -1.71
CBX1P83916 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX1P83916 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX1P83916 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 AC066616.2-201ENST00000559334 1481 ntBASIC4.37□□□□□ -1.71
CBX1P83916 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 EXOC5P1-201ENST00000510543 1969 ntBASIC4.37□□□□□ -1.71
CBX1P83916 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 RN7SKP15-201ENST00000364742 309 ntBASIC4.37□□□□□ -1.71
CBX1P83916 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 Z97832.1-201ENST00000402490 328 ntBASIC4.37□□□□□ -1.71
CBX1P83916 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.37□□□□□ -1.71
CBX1P83916 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
CBX1P83916 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 RPL35AP24-201ENST00000413846 330 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX1P83916 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX1P83916 NPM1P24-201ENST00000428039 894 ntBASIC4.37□□□□□ -1.71
CBX1P83916 HMGB3P5-201ENST00000428894 612 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.37□□□□□ -1.71
CBX1P83916 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.37□□□□□ -1.71
CBX1P83916 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX1P83916 RPS27AP2-201ENST00000457576 465 ntBASIC4.37□□□□□ -1.71
CBX1P83916 RPL23AP14-201ENST00000468281 468 ntBASIC4.37□□□□□ -1.71
CBX1P83916 MTND6P6-201ENST00000478031 263 ntBASIC4.37□□□□□ -1.71
CBX1P83916 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX1P83916 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 AC108157.1-201ENST00000510511 539 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX1P83916 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX1P83916 RNU6-889P-201ENST00000517189 103 ntBASIC4.37□□□□□ -1.71
CBX1P83916 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX1P83916 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX1P83916 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 AL121576.1-201ENST00000556055 276 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX1P83916 FAM27B-201ENST00000610601 213 ntBASIC4.37□□□□□ -1.71
CBX1P83916 AL627230.1-201ENST00000613077 211 ntBASIC4.37□□□□□ -1.71
CBX1P83916 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 CCT8P1-201ENST00000413611 1657 ntBASIC4.37□□□□□ -1.71
CBX1P83916 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms