Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN18P56856 AL590392.1-201ENST00000604960 446 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN18P56856 AC055764.2-201ENST00000610089 670 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 AC243654.2-201ENST00000612843 443 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLDN18P56856 AL391597.1-201ENST00000618707 694 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 OR52H1-202ENST00000641796 1061 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 AP001002.1-201ENST00000625148 1513 ntBASIC3.93□□□□□ -1.78
CLDN18P56856 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLDN18P56856 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN18P56856 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN18P56856 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLDN18P56856 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN18P56856 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CLDN18P56856 RNU6-819P-201ENST00000364116 107 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 RNA5SP366-201ENST00000365454 123 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AL603766.1-201ENST00000407763 664 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN18P56856 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN18P56856 ATP5G1P3-201ENST00000463301 410 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN18P56856 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 MYL12AP1-201ENST00000518490 515 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC008676.3-201ENST00000521237 435 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AC138701.1-201ENST00000524329 714 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 OR5BC1P-201ENST00000529327 739 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN18P56856 EIF1AXP2-201ENST00000555940 413 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 PARP1P2-201ENST00000556806 195 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN18P56856 MIR3939-201ENST00000582614 106 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 NF1P5-201ENST00000588287 448 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 MIR6716-201ENST00000613413 80 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN18P56856 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN18P56856 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLDN18P56856 AL139254.3-201ENST00000641097 674 ntBASIC3.92□□□□□ -1.78
CLDN18P56856 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN18P56856 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLDN18P56856 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN18P56856 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN18P56856 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN18P56856 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
CLDN18P56856 RNU6-31P-201ENST00000384388 108 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AL583835.1-201ENST00000399570 407 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC097374.1-203ENST00000400783 485 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN18P56856 RPL23AP26-201ENST00000412728 464 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 VDAC1P9-201ENST00000412766 841 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC105402.1-201ENST00000413336 545 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 RSL24D1P6-201ENST00000426934 401 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 RPEP2-201ENST00000432149 701 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN18P56856 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN18P56856 ELOCP3-201ENST00000439303 348 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC069285.2-201ENST00000440210 275 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC023512.1-201ENST00000444513 499 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN18P56856 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN18P56856 AC010469.1-201ENST00000463864 576 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC108022.1-201ENST00000493466 478 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN18P56856 AC023050.1-201ENST00000498198 304 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 PRELID3BP7-201ENST00000503606 469 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 SNORA70.17-201ENST00000516449 133 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN18P56856 CYCSP28-201ENST00000534284 321 ntBASIC3.91□□□□□ -1.78
CLDN18P56856 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN18P56856 AC009268.1-201ENST00000561352 1203 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms