Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 AC087477.6-201ENST00000559595 843 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 OR1F2P-201ENST00000570470 933 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 MIR5699-201ENST00000578903 90 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC022726.1-201ENST00000587475 207 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 AL022067.1-201ENST00000602426 454 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC116447.1-201ENST00000613153 453 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 AC139713.2-215ENST00000641428 5037 ntBASIC5□□□□□ -1.61
HDAC4P56524 MAPK10-286ENST00000641208 8747 ntBASIC5□□□□□ -1.61
HDAC4P56524 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5□□□□□ -1.61
HDAC4P56524 AC107068.1-201ENST00000563286 4218 ntBASIC5□□□□□ -1.61
HDAC4P56524 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5□□□□□ -1.61
HDAC4P56524 RNU1-94P-201ENST00000362627 173 ntBASIC5□□□□□ -1.61
HDAC4P56524 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5□□□□□ -1.61
HDAC4P56524 RNU6-603P-201ENST00000411403 107 ntBASIC5□□□□□ -1.61
HDAC4P56524 EIF4A1P3-201ENST00000411521 244 ntBASIC5□□□□□ -1.61
HDAC4P56524 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5□□□□□ -1.61
HDAC4P56524 HMGB3P31-201ENST00000413333 595 ntBASIC5□□□□□ -1.61
HDAC4P56524 VTA1P1-201ENST00000414044 866 ntBASIC5□□□□□ -1.61
HDAC4P56524 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 LINC01881-201ENST00000416103 412 ntBASIC5□□□□□ -1.61
HDAC4P56524 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AL353597.2-202ENST00000434901 373 ntBASIC5□□□□□ -1.61
HDAC4P56524 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AC000041.1-201ENST00000439655 175 ntBASIC5□□□□□ -1.61
HDAC4P56524 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 RPL31P44-201ENST00000447680 377 ntBASIC5□□□□□ -1.61
HDAC4P56524 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AC118282.1-201ENST00000506408 765 ntBASIC5□□□□□ -1.61
HDAC4P56524 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 HMGB3P13-201ENST00000511263 607 ntBASIC5□□□□□ -1.61
HDAC4P56524 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5□□□□□ -1.61
HDAC4P56524 AC011611.5-201ENST00000552477 578 ntBASIC5□□□□□ -1.61
HDAC4P56524 FKBP1BP1-201ENST00000553366 325 ntBASIC5□□□□□ -1.61
HDAC4P56524 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 MIR8069-1-201ENST00000616627 86 ntBASIC5□□□□□ -1.61
HDAC4P56524 AL023881.1-201ENST00000621088 301 ntBASIC5□□□□□ -1.61
HDAC4P56524 MIR8069-2-201ENST00000621412 86 ntBASIC5□□□□□ -1.61
HDAC4P56524 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5□□□□□ -1.61
HDAC4P56524 AC015726.3-201ENST00000624501 418 ntBASIC5□□□□□ -1.61
HDAC4P56524 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 AC006927.4-201ENST00000639187 543 ntBASIC5□□□□□ -1.61
HDAC4P56524 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
HDAC4P56524 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HDAC4P56524 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
HDAC4P56524 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HDAC4P56524 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HDAC4P56524 NCLP2-201ENST00000416078 1462 ntBASIC5□□□□□ -1.61
HDAC4P56524 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDAC4P56524 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.99□□□□□ -1.61
HDAC4P56524 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 GTF2H2B-203ENST00000508065 1432 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 RNA5SP191-201ENST00000362585 102 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 MIR708-201ENST00000390708 88 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 AL121834.1-202ENST00000404494 277 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 GAPDHP49-201ENST00000421421 961 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC004074.1-201ENST00000421810 1063 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.99□□□□□ -1.61
HDAC4P56524 OR2B7P-201ENST00000429302 934 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 EIF4A1P11-201ENST00000451239 222 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 GTF2IP12-201ENST00000456547 356 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 DUXAP8-207ENST00000456786 622 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.99□□□□□ -1.61
HDAC4P56524 RPL7AP28-201ENST00000464513 571 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms