Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHA4P54764 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC074141.1-201ENST00000588129 2995 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHA4P54764 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 RNA5SP65-201ENST00000363166 119 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 RNA5SP394-201ENST00000364216 119 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 SNORA64.3-201ENST00000365647 134 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 RNU6-639P-201ENST00000384074 107 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 Y_RNA.445-201ENST00000384168 102 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 MIR1-2-201ENST00000384961 85 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 PRRC2CP1-201ENST00000404428 159 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHA4P54764 RNU4-26P-201ENST00000410270 107 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC007283.2-201ENST00000424739 197 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC239367.3-201ENST00000428996 814 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL645939.3-201ENST00000435408 225 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 RPS15AP9-201ENST00000439856 381 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 COL11A2P1-205ENST00000441798 676 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 SLC25A51P1-201ENST00000468432 871 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 RN7SL741P-201ENST00000482473 289 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC093267.1-201ENST00000489176 961 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 RN7SL568P-201ENST00000493069 298 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 TXNP6-201ENST00000510190 310 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 RNU6-559P-201ENST00000516151 98 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 AP003497.1-201ENST00000528472 562 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AP000907.2-201ENST00000530827 353 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL591767.3-201ENST00000554632 525 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 FXNP1-201ENST00000555153 337 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC026464.5-201ENST00000562497 722 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC006270.2-201ENST00000578523 652 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 SNORA70D-201ENST00000578836 135 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHA4P54764 AL353997.4-201ENST00000586196 166 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.5□□□□□ -1.37
EPHA4P54764 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHA4P54764 SNRPGP17-201ENST00000603780 214 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC016925.2-201ENST00000605108 242 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC019257.2-201ENST00000605539 497 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 7SK.10-201ENST00000621414 298 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 AL354702.2-202ENST00000641481 890 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
EPHA4P54764 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 AC132219.2-201ENST00000624416 2327 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 AC105749.1-201ENST00000631338 2008 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 WBP11P1-201ENST00000562560 1931 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
EPHA4P54764 MROH3P-201ENST00000435735 2676 ntBASIC6.5□□□□□ -1.37
EPHA4P54764 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHA4P54764 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHA4P54764 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHA4P54764 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
EPHA4P54764 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHA4P54764 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHA4P54764 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
EPHA4P54764 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHA4P54764 MTND5P1-201ENST00000445440 1375 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms