Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORA11B-201ENST00000408175 129 ntBASIC5.34□□□□□ -1.55
NEK3P51956 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 RPL22P18-201ENST00000417197 377 ntBASIC5.34□□□□□ -1.55
NEK3P51956 OR2X1P-201ENST00000421144 687 ntBASIC5.34□□□□□ -1.55
NEK3P51956 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 AL138785.1-201ENST00000425821 331 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 USP9YP31-201ENST00000431405 881 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC241584.1-201ENST00000438469 1241 ntBASIC5.34□□□□□ -1.55
NEK3P51956 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.34□□□□□ -1.55
NEK3P51956 Z92846.1-201ENST00000456203 268 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC011979.1-201ENST00000472300 483 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 RPSAP50-201ENST00000481955 852 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC084024.2-201ENST00000503480 791 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.34□□□□□ -1.55
NEK3P51956 SNRPCP2-201ENST00000504370 475 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC011352.3-201ENST00000505162 593 ntBASIC5.34□□□□□ -1.55
NEK3P51956 MTATP6P22-201ENST00000507369 598 ntBASIC5.34□□□□□ -1.55
NEK3P51956 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.34□□□□□ -1.55
NEK3P51956 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 RNA5SP373-201ENST00000517271 95 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC022360.1-201ENST00000521058 340 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AP006245.2-201ENST00000522004 300 ntBASIC5.34□□□□□ -1.55
NEK3P51956 EEF1A1P37-201ENST00000522748 715 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.34□□□□□ -1.55
NEK3P51956 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.34□□□□□ -1.55
NEK3P51956 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 AC024940.3-201ENST00000538551 316 ntBASIC5.34□□□□□ -1.55
NEK3P51956 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.34□□□□□ -1.55
NEK3P51956 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.34□□□□□ -1.55
NEK3P51956 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 AC022662.1-201ENST00000580252 331 ntBASIC5.34□□□□□ -1.55
NEK3P51956 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 AC010857.1-201ENST00000606398 594 ntBASIC5.34□□□□□ -1.55
NEK3P51956 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 MIR7155-201ENST00000615925 56 ntBASIC5.34□□□□□ -1.55
NEK3P51956 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 AC022509.4-201ENST00000621404 572 ntBASIC5.34□□□□□ -1.55
NEK3P51956 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.34□□□□□ -1.55
NEK3P51956 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.34□□□□□ -1.56
NEK3P51956 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
NEK3P51956 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
NEK3P51956 Z95327.2-201ENST00000414579 1873 ntBASIC5.33□□□□□ -1.56
NEK3P51956 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 RNU6-560P-201ENST00000364007 108 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RNU6-1293P-201ENST00000384077 107 ntBASIC5.33□□□□□ -1.56
NEK3P51956 MIR765-201ENST00000390226 114 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AL161909.1-201ENST00000397390 712 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AL078604.1-201ENST00000404609 466 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AL133264.1-201ENST00000407157 562 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC016769.2-201ENST00000414815 475 ntBASIC5.33□□□□□ -1.56
NEK3P51956 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
NEK3P51956 NUP35P2-201ENST00000416748 943 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.33□□□□□ -1.56
NEK3P51956 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.33□□□□□ -1.56
NEK3P51956 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
NEK3P51956 SEPT7P5-201ENST00000434048 306 ntBASIC5.33□□□□□ -1.56
NEK3P51956 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.33□□□□□ -1.56
NEK3P51956 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.33□□□□□ -1.56
NEK3P51956 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.33□□□□□ -1.56
NEK3P51956 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.33□□□□□ -1.56
NEK3P51956 AC079168.1-201ENST00000458741 345 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RPL5P24-201ENST00000463742 885 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC058823.1-201ENST00000485315 474 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RPL7P41-201ENST00000485823 957 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RPL32P9-201ENST00000487963 407 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.33□□□□□ -1.56
NEK3P51956 PGBD4P4-201ENST00000509673 613 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC092593.2-201ENST00000513866 913 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RNU6-885P-201ENST00000516607 104 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC087808.1-201ENST00000520501 361 ntBASIC5.33□□□□□ -1.56
NEK3P51956 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.33□□□□□ -1.56
NEK3P51956 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.33□□□□□ -1.56
NEK3P51956 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.33□□□□□ -1.56
NEK3P51956 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 OR11J2P-201ENST00000555298 907 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC006349.1-201ENST00000555526 235 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AADACP1-206ENST00000561502 1193 ntBASIC5.33□□□□□ -1.56
NEK3P51956 MIR3691-201ENST00000578066 90 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC090312.1-201ENST00000580637 348 ntBASIC5.33□□□□□ -1.56
NEK3P51956 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.33□□□□□ -1.56
NEK3P51956 AL158163.2-201ENST00000619110 700 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms