Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.16□□□□□ -1.74
HTTP42858 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.16□□□□□ -1.74
HTTP42858 SNORA70.17-201ENST00000516449 133 ntBASIC4.16□□□□□ -1.74
HTTP42858 AC092747.2-201ENST00000545069 983 ntBASIC4.16□□□□□ -1.74
HTTP42858 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 AC023509.5-201ENST00000617434 807 ntBASIC4.16□□□□□ -1.74
HTTP42858 AC234782.5-201ENST00000617723 324 ntBASIC4.16□□□□□ -1.74
HTTP42858 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.16□□□□□ -1.74
HTTP42858 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 AC007529.1-201ENST00000418574 2178 ntBASIC4.15□□□□□ -1.74
HTTP42858 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.15□□□□□ -1.74
HTTP42858 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.15□□□□□ -1.74
HTTP42858 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.15□□□□□ -1.74
HTTP42858 RPL12P22-201ENST00000519073 490 ntBASIC4.15□□□□□ -1.74
HTTP42858 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.15□□□□□ -1.74
HTTP42858 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.15□□□□□ -1.74
HTTP42858 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC4.15□□□□□ -1.74
HTTP42858 AC026368.1-201ENST00000614934 690 ntBASIC4.15□□□□□ -1.74
HTTP42858 ATP5A1P2-202ENST00000616464 443 ntBASIC4.15□□□□□ -1.74
HTTP42858 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HTTP42858 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HTTP42858 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HTTP42858 VN1R25P-201ENST00000443385 738 ntBASIC4.15□□□□□ -1.75
HTTP42858 RPL21P11-201ENST00000461458 483 ntBASIC4.15□□□□□ -1.75
HTTP42858 AC022968.1-201ENST00000567372 442 ntBASIC4.15□□□□□ -1.75
HTTP42858 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HTTP42858 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.15□□□□□ -1.75
HTTP42858 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.15□□□□□ -1.75
HTTP42858 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
HTTP42858 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HTTP42858 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HTTP42858 UBTFL3-201ENST00000418934 1024 ntBASIC4.15□□□□□ -1.75
HTTP42858 RPS26P2-201ENST00000440331 348 ntBASIC4.15□□□□□ -1.75
HTTP42858 MRPL35P4-201ENST00000453682 566 ntBASIC4.15□□□□□ -1.75
HTTP42858 UBTFL6-201ENST00000477929 1024 ntBASIC4.15□□□□□ -1.75
HTTP42858 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.15□□□□□ -1.75
HTTP42858 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.15□□□□□ -1.75
HTTP42858 AL451007.1-201ENST00000595491 289 ntBASIC4.15□□□□□ -1.75
HTTP42858 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.14□□□□□ -1.75
HTTP42858 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HTTP42858 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HTTP42858 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
HTTP42858 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 GNG5P1-201ENST00000255500 204 ntBASIC4.14□□□□□ -1.75
HTTP42858 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HTTP42858 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 PTP4A1P3-201ENST00000433661 420 ntBASIC4.14□□□□□ -1.75
HTTP42858 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.14□□□□□ -1.75
HTTP42858 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.14□□□□□ -1.75
HTTP42858 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.14□□□□□ -1.75
HTTP42858 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.14□□□□□ -1.75
HTTP42858 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.14□□□□□ -1.75
HTTP42858 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 RNA5SP50-201ENST00000363731 107 ntBASIC4.14□□□□□ -1.75
HTTP42858 SNORA5.1-201ENST00000384275 131 ntBASIC4.14□□□□□ -1.75
HTTP42858 OOSP1P1-201ENST00000423265 274 ntBASIC4.14□□□□□ -1.75
HTTP42858 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.14□□□□□ -1.75
HTTP42858 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.14□□□□□ -1.75
HTTP42858 AC005476.1-201ENST00000554427 397 ntBASIC4.14□□□□□ -1.75
HTTP42858 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HTTP42858 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 AC079777.1-201ENST00000623836 1953 ntBASIC4.14□□□□□ -1.75
HTTP42858 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HTTP42858 HSPA8P17-201ENST00000427029 1382 ntBASIC4.14□□□□□ -1.75
HTTP42858 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC4.13□□□□□ -1.75
HTTP42858 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HTTP42858 AL158071.1-201ENST00000430315 461 ntBASIC4.13□□□□□ -1.75
HTTP42858 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.13□□□□□ -1.75
HTTP42858 AC027309.2-201ENST00000520566 192 ntBASIC4.13□□□□□ -1.75
HTTP42858 UBE2NP1-201ENST00000545592 458 ntBASIC4.13□□□□□ -1.75
HTTP42858 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.13□□□□□ -1.75
HTTP42858 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
HTTP42858 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HTTP42858 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
HTTP42858 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.13□□□□□ -1.75
HTTP42858 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.13□□□□□ -1.75
HTTP42858 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms