Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC026634.1-201ENST00000634369 198 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL6A2P12110 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.65□□□□□ -1.51
COL6A2P12110 LINC00561-201ENST00000565815 2738 ntBASIC5.65□□□□□ -1.51
COL6A2P12110 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
COL6A2P12110 PDZK1P1-202ENST00000425209 1350 ntBASIC5.65□□□□□ -1.51
COL6A2P12110 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL6A2P12110 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL6A2P12110 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.65□□□□□ -1.51
COL6A2P12110 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
COL6A2P12110 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.65□□□□□ -1.51
COL6A2P12110 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL6A2P12110 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC006206.1-201ENST00000544842 3387 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 Y_RNA.88-201ENST00000363029 99 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RNU6-433P-201ENST00000363216 104 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RNU6-216P-201ENST00000363282 104 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RNU1-65P-201ENST00000363919 148 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 RNU6-225P-201ENST00000384613 103 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 MIR130B-202ENST00000385018 82 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC007066.1-201ENST00000392902 381 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RPL23AP29-201ENST00000397284 453 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 EI24P3-201ENST00000399046 1062 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC096921.1-201ENST00000411661 375 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 GNG5P5-201ENST00000420444 220 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 AL136231.1-201ENST00000429407 730 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.64□□□□□ -1.51
COL6A2P12110 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC009963.3-201ENST00000458090 486 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 NXT1P1-201ENST00000458481 316 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 HMGN2P25-201ENST00000486956 268 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 RPL37P23-201ENST00000492641 294 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL6A2P12110 RN7SKP244-201ENST00000516513 307 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC139365.2-201ENST00000517972 253 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.64□□□□□ -1.51
COL6A2P12110 IGKV3D-25-201ENST00000519599 235 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC027309.2-201ENST00000520566 192 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC008562.1-201ENST00000521763 330 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 WBP1LP3-201ENST00000523033 208 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 MED28P5-201ENST00000528254 438 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 SLC2A13P1-201ENST00000531560 322 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC122688.1-201ENST00000541494 223 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC125612.1-201ENST00000547580 377 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 EEF1B2P4-201ENST00000551398 348 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 TPRKBP2-201ENST00000565969 475 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 KPNA2P3-201ENST00000584190 848 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.64□□□□□ -1.51
COL6A2P12110 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 MIR6793-201ENST00000612376 63 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 AC079228.1-201ENST00000624774 1049 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.64□□□□□ -1.51
COL6A2P12110 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC111152.1-202ENST00000635848 339 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
COL6A2P12110 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL6A2P12110 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.64□□□□□ -1.51
COL6A2P12110 AL590763.1-201ENST00000398297 1545 ntBASIC5.64□□□□□ -1.51
COL6A2P12110 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 AC019072.1-201ENST00000604535 1551 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AL121839.2-201ENST00000565058 6943 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms